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SCNpilot_expt_1000_bf_scaffold_17586_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2425..3300

Top 3 Functional Annotations

Value Algorithm Source
Putative LysR, transcriptional regulator {ECO:0000313|EMBL:AHK46726.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 291.0
  • Bit_score: 503
  • Evalue 1.40e-139
HTH-type transcriptional activator CmpR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYN6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 290.0
  • Bit_score: 488
  • Evalue 3.40e-135
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 288.0
  • Bit_score: 443
  • Evalue 6.80e-122
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCGTTATGTCCAGCTTCGCGCCTTCCACAATGTCGCGATCCATGGCGGCTTCTCGCGCGCCGCCGAAGCCCTGTTCCTCACCCAGCCGGCGGTCTCCGACCAGGTGCGCAAGCTGGAGGAGGAATATGACGTCCTGCTGTTCAACCGCACCAAGAAGCAGGTGACGCTGACCCATGCCGGCCAGCAATTGCTGGAAGTCACCCGCCGCATGTTCGATATCGAGCAGCAGGCGCTCGATCTCCTCTCCGAATCGCGCGCGCTTCGGGCCGGCAAGCTGCGCATCGTCGCCGATGCCGCCCACCATCTGCTGCATATCCTCGCCGTCTTCCAGCGCACCTATCCGACCGTGCAGGTTTCCATCGATGCCGGCAATACCGAGACGGTGATTTCCAGCCTGCATGCCTATGAGGCCGATATCGGCGTGCTCGGCGAGATACCACCGACCGGCGATTTCGACATTTTGAAAATCAACTCGACGCCGATCATCGCCTTCTGCAGCCGCGACCATCCGCTGGCCGCCGCTGGGCAGGCGACGCTGGAGGAACTGGCAAAGCTGCCGCTGGTCATGCGCGAGCGCGGCTCGAAGACGCGGCAGAAGCTGGAGGCGATGGCCGAGCAATGCGGCGTGACGTTGATGCCGCTGATCGAGGCCGAGGGCCGCGAGGCGGTGCGCGAGATCGTCGCGGCCGGCGGCGGGATCGGCTTCGTCTCCTCGGCCGAATTCGGCCAGGACGGCCGCCTCGCGCCGATCCGCATCGACGCGCCGGAAATGCTGATGGACGAGGCGCTGATCTGCCTGCGCGAGCGCAGCAACGGCAAGCTGGTCAGCGCCTTCTACGACATCGCCCGCAAGCTGACCAAGGCGACGGATTGA
PROTEIN sequence
Length: 292
MRYVQLRAFHNVAIHGGFSRAAEALFLTQPAVSDQVRKLEEEYDVLLFNRTKKQVTLTHAGQQLLEVTRRMFDIEQQALDLLSESRALRAGKLRIVADAAHHLLHILAVFQRTYPTVQVSIDAGNTETVISSLHAYEADIGVLGEIPPTGDFDILKINSTPIIAFCSRDHPLAAAGQATLEELAKLPLVMRERGSKTRQKLEAMAEQCGVTLMPLIEAEGREAVREIVAAGGGIGFVSSAEFGQDGRLAPIRIDAPEMLMDEALICLRERSNGKLVSAFYDIARKLTKATD*