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SCNpilot_expt_1000_bf_scaffold_9695_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1767..4265

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA/DNA helicase protein Lhr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIQ9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 841.0
  • Bit_score: 1520
  • Evalue 0.0
  • rbh
ATP-dependent RNA/DNA helicase protein Lhr {ECO:0000313|EMBL:EYR83162.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 841.0
  • Bit_score: 1520
  • Evalue 0.0
lhr; ATP-dependent RNA/DNA helicase (EC:3.6.1.-); K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 837.0
  • Bit_score: 1336
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2499
GTGAGCATCATCGATTCCGCCGCCGGCCTTTCCCTTCTCCCCAAATCCTTCGCCGACTGGTTCGCGGCCAAGGGCTGGCAACCGCGTGCCCACCAGATGGAGCTTCTGGCGCGCGCCACGGCGGGGGAAAGCCTGCTCCTGATCGCGCCCACCGGCGCGGGCAAGACGCTGGCCGGCTTCCTGCCAGCGCTGACGGACCTTGCGCAGCGCGGCAAAATCCCGCCCGGCTCCGCCTTCACCGGCATCCACACGCTCTATATCTCGCCGCTCAAGGCGCTTGCCGTCGATATCGAGCGCAACCTGATGAAGCCCGTCTGCGAAATGGGCCTGCCGATCACCATCGAGACGCGCACCGGCGACACGCCGCAGGCCAAGCGCCAGCGCCAGCGCCTCAACCCGCCGGACATCCTGCTGACGACGCCGGAACAGGTCGCCCTCCTCATCGCCAACGGCGAGGCCCCGCGCTTCTTCAAGGACCTGAAATACGTCATCTTCGACGAACTGCATTCGCTCGTCACCTCCAAGCGCGGCCATCTCCTCTCGCTCGGTCTCGCGCGCCTGCGCCGGCTTGCGCCGGGGCTCAGGNNNNNNNNNNNNNNNNGCCGCTGGCTGGTCGCGCAGTCGCCGGACGCGGAGAACCATGCCGGGCTCGTCACGGCGCCGGGCGGGGCAAAGCCGATCATCACCATCCTCAAGAGCGAGGAGCGGGTGCCGTGGTCGGGCCATCAGGCCAAATATGCGATGCCCGAGGTCTATGCGGCAATCAAGGCGCACAGGACGTCGCTGCTCTTCGTCAACACGCGCAGCCAGGCGGAAATCCTCTTCCAGGAACTGTGGAACATCAACGAGGACACGCTGCCGATCGCCCTGCACCACGGCTCGCTCGATGTCGGCCAGCGGCGCAAGGTGGAAGAGGCCATGGCGGAGAACCGCCTGCGCGCCGTCGTCGCCACCTCGACGCTCGACCTCGGCATCGACTGGGGCGATGTCGATCTCGTCATCCATGTCGGCGCGCCGAAGGGCGCCTCGCGGCTCGCCCAGCGCATCGGCCGCGCCAACCACCGCATGGACGAGCCGAGCCGCGCCATCCTCGTGCCGGCCAACCGCTTCGAGGTGATGGAGTGCCAGGCGGCGCTCGACGCCAACTATCTCGGCGCGCAGGACACGCCCCCCGTCGGCGAGGGCACGCTCGACGTGCTCGCCCAGCACGTCCTCGGCATGGCCTGCGCCGCGCCCTTCAACGAGGACGCGCTCTTTGCCGAAGTCACCACCGCCTCGCCCTATACCGGCCTTTCGCGCGAAAAGTTCGGGCGGATCGTGCAGTTCGTCGCCACCGGCGGCTATGCACTGAAGACCTATGAGCGCTATGCCCGCATCCGCAAGACCGTCGACGGCCTCTGGCGCATCTCCAATCCTGGGGTCGCCCAGCAATACCGCCTCAACCTCGGCACCATCGTCGAGATGCCGATGCTGAACGTGCGCATGGTCAAACGTGGCGCGAAGGGCGCGGTCGGGCGCGGCGGGGCCTCGCTCGGCAAGGTGGAGGAATATTTCCTCGAAATGCTCTCGCCCGGCGACACCTTCCTGTTCTCCGGCAAGGTGCTGCGCTTCGAGGGCATCCGCGAGAACGAATGTCTCGTCTCCCAGGCCTTCTCGCTCGATCCGAAGGTGCCGGCCTATGCGGGCGGCAAGTTCCCGCTCTCCACCTATCTTGCCGACCAGGTGCGCGGCATGCTGGACGATCCGCACCGCTGGGGCGAACTGCCCGAGCAGGTGCGAGACTGGCTCGCGCTGCAACGCGACGTCTCCGCCCTGCCGAAGCGCGACGAACTCCTTATCGAGACCTTTCCGCGCGGCAGCCGGCATTACATGGTCGCCTATCCCTTCGAGGGACGGCTGGCGCACCAGACGCTCGGCATGCTGCTGACGCGCCGGCTGGAGCGCGCGGGCCGGCGGCCGCTCGGCTTCGTCGCCACCGATTATTCGCTGGCGATCTGGGCGCTGGACGATCTCGGCCATGCCTTCGCCGTCGAGCGGCCGTCGCTCCAAAACCTCTTCGACGAGGACATGCTGGGCGACGATCTGGAAGCCTGGCTCGACGAAAGCTTCATGCTGAAGCGCACCTTCCGCAATTGCGCCGTGATCGCGGGGCTGATCGAGCAGCGCCATCCGGGCAAGGAAAAGACCGGGCGGCAGGTCACGGTTTCCGCCGACCTCATCTACGACGTGCTCAGAAGCCACGAGCCGGATCATATCCTGCTGGAGGCCACGCGCGCCGATGCGGCGGCGGGGCTTTTGGATATTCAGCGATTGGGCGATATGCTGGCGCGAATCAAGGGCCACATCGCCCACCGGCGGCTCGACCGCATCTCGCCGCTCGCCGTGCCGATCATGCTGGAGATCGGCAGGGAGACGGTGGCGGGCGAGGCGCAGGATTCGCTTCTGGCGGAAGCCGCCGAGGATCTGATCGCCGAGGCGATGGGCGACGCGGGCATTTAA
PROTEIN sequence
Length: 833
VSIIDSAAGLSLLPKSFADWFAAKGWQPRAHQMELLARATAGESLLLIAPTGAGKTLAGFLPALTDLAQRGKIPPGSAFTGIHTLYISPLKALAVDIERNLMKPVCEMGLPITIETRTGDTPQAKRQRQRLNPPDILLTTPEQVALLIANGEAPRFFKDLKYVIFDELHSLVTSKRGHLLSLGLARLRRLAPGLRXXXXXXRWLVAQSPDAENHAGLVTAPGGAKPIITILKSEERVPWSGHQAKYAMPEVYAAIKAHRTSLLFVNTRSQAEILFQELWNINEDTLPIALHHGSLDVGQRRKVEEAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECQAALDANYLGAQDTPPVGEGTLDVLAQHVLGMACAAPFNEDALFAEVTTASPYTGLSREKFGRIVQFVATGGYALKTYERYARIRKTVDGLWRISNPGVAQQYRLNLGTIVEMPMLNVRMVKRGAKGAVGRGGASLGKVEEYFLEMLSPGDTFLFSGKVLRFEGIRENECLVSQAFSLDPKVPAYAGGKFPLSTYLADQVRGMLDDPHRWGELPEQVRDWLALQRDVSALPKRDELLIETFPRGSRHYMVAYPFEGRLAHQTLGMLLTRRLERAGRRPLGFVATDYSLAIWALDDLGHAFAVERPSLQNLFDEDMLGDDLEAWLDESFMLKRTFRNCAVIAGLIEQRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRADAAAGLLDIQRLGDMLARIKGHIAHRRLDRISPLAVPIMLEIGRETVAGEAQDSLLAEAAEDLIAEAMGDAGI*