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SCNpilot_expt_1000_bf_scaffold_9695_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6611..7114

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D348_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 168.0
  • Bit_score: 287
  • Evalue 8.70e-75
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EYR83164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 168.0
  • Bit_score: 287
  • Evalue 1.20e-74
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 167.0
  • Bit_score: 240
  • Evalue 2.90e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGAAGGATACCCGCCGCTCGGGCTGCCCGATCAAACTGACCCTCGAGATCCTCGGGGACCGCTGGAGCCTGATCGTGCTGCGCGACATGATGTTCGGCAATCGCCGGCACTTCCGCGAGCTCTTGACCGGATCGGAGGAAGGCATCGCCTCGAACATCCTGGCGGACCGGCTGCGCCGGCTGCTCGCCGAAGGGCTGATCACCAGGGCGGACGACCCGAGCCACCGGCAGAAGGCCATCTACAGCCTCACCGAGATGGGCATCGCGCTCGTGCCCGTCTTCGCGATGATGGGCGCCTGGGGCCGGCGCTTCCTGCCGGTGACGCAGGACCTGTCGATCCGTGCCGAACTGCTCGAAGACGGCGGGCCGGCGATGTGGGAGGCCTTCATGGAGGAACTGCGCGCCATACATCTCGGCGGCCCGCCGCCGGCACGCTCCGTCTTCGGCGAGCTCAGGGCCGCCTACGAGGCGGTCGTCGCCCGCAGGGCCGCAACCGGCGCTTGA
PROTEIN sequence
Length: 168
MKDTRRSGCPIKLTLEILGDRWSLIVLRDMMFGNRRHFRELLTGSEEGIASNILADRLRRLLAEGLITRADDPSHRQKAIYSLTEMGIALVPVFAMMGAWGRRFLPVTQDLSIRAELLEDGGPAMWEAFMEELRAIHLGGPPPARSVFGELRAAYEAVVARRAATGA*