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SCNpilot_expt_1000_bf_scaffold_12633_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5509..6396

Top 3 Functional Annotations

Value Algorithm Source
ribokinase n=1 Tax=Rhizobium meliloti RepID=UPI000305AB11 similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 294.0
  • Bit_score: 485
  • Evalue 2.90e-134
  • rbh
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:EGP54142.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 295.0
  • Bit_score: 485
  • Evalue 4.10e-134
ribokinase-like domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 295.0
  • Bit_score: 478
  • Evalue 1.50e-132
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCGCATCCCGCCAGAATCCTCGCCTTCGGTGACAATGTCGTTGATTGCTATCGCGACCAGAACCTGATGTTTCCCGGCGGGAACTGCGTCAACCATGCCGTCTTCGCACGCCGCGCCGGCGCCGAGACCGCCTATGCCGGCGCGGTCTGCGACGACGATGCCGGGCGCCTGATCCGTGCGGCCCTCGCCGAGGAAGGGGTCGACGTCTCCCTGCTGCGGATCGAGCCGGGGCAGACGGCCTATTGCGTGATCGAGACGCAGGACGGCGACCGCGTCTTCGTCGGCGCCAATCTCGGCCCGTCGATCATCGCGCCCTCGCCGGCCGACCTGTCGCGGCTTTCGCAATTCGACGCCGTCCACACCGGCCGGTCGAGCCATGTCGACGCCTGGCTGCCGCGCTTTGCCGCGGTGACGAAAGTCTCCTACGATCTCGCCACGGTGCACGATCCAGAGCGCATCGCGAAGGTCGCGCCGTACAGCTTCCTGATCGCCTTCTCCGCCGGCGGCATGTCGCGCCGGGAGGCGCTTTCGCTGGCGCAGCGTGCCCGGACGGCGGGGGCCCGCTGGAGCCTCGTCACCCGCGGCACCGACGGGGCTCTTCTTGCCGGCGAAACCGGCGTCTTCGAAGCCCCGGCCAAGACGGTCGAGGCCATCGACACGCTGGGCGCAGGAGATACCTATATCGCCAACGTCCTCGTCGGCCTGCTCGACGACCGGCCGCCCGAGGCCATCCTGGAAAACGCCGCTGAGGCCGCCGCCCGGACATGCCTGATGCGCGGCGCCTTCGGGCACCAGGCCCCGATGAGCGTCGACCTCTCCAACATGATGAGCCTGGACGAGATCTACCGCACCACCCGGCCCGCGAAGGTGCCCGCCGAGGCGTGA
PROTEIN sequence
Length: 296
MPHPARILAFGDNVVDCYRDQNLMFPGGNCVNHAVFARRAGAETAYAGAVCDDDAGRLIRAALAEEGVDVSLLRIEPGQTAYCVIETQDGDRVFVGANLGPSIIAPSPADLSRLSQFDAVHTGRSSHVDAWLPRFAAVTKVSYDLATVHDPERIAKVAPYSFLIAFSAGGMSRREALSLAQRARTAGARWSLVTRGTDGALLAGETGVFEAPAKTVEAIDTLGAGDTYIANVLVGLLDDRPPEAILENAAEAAARTCLMRGAFGHQAPMSVDLSNMMSLDEIYRTTRPAKVPAEA*