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SCNpilot_expt_1000_bf_scaffold_12633_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8115..8900

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease III n=1 Tax=Rhizobium sp. CF122 RepID=J3BR65_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 258.0
  • Bit_score: 464
  • Evalue 8.10e-128
  • rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EJL55894.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 258.0
  • Bit_score: 464
  • Evalue 1.10e-127
exoA; exodeoxyribonuclease (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 255.0
  • Bit_score: 456
  • Evalue 4.10e-126
  • rbh

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAAGATCGCGACCTACAACGTCAACGGCGTGAACGGGCGCCTCGCCGTGCTTCTTCGCTGGCTTGAGGACGACGCGCCCGACGTGGTGTGCCTGCAGGAATTGAAATCGCCGAACGACCGGTTCCCGCGCGCGGAACTGGAACGTGCCGGCTATGGGGCGGTCTGGCACGGCCAGAAAAGCTGGAACGGCGTTGCGATCCTCGCAAAGGGCCTGGTGCCCCTTCTCACGCGCCGGGGCCTGCCGGGCGACCCTGACGACACGCACAGCCGCTACATCGAAGCCGCCGTCGACGGGATGCTGGTCGGCTGTCTCTACCTTCCCAACGGCAACCCTGCTCCCGGCCCGAAGTTCGATTACAAGCTGCGCTGGTTCCAGCGCCTTCTCGCCTATGCGGCGGAACTGATCGAGCTCGATGTTCCCGTTCTGCTGGCCGGCGACTACAATGTCATGCCGACCGACCTCGAAGTCCATGCGCCCGAGCGCTGGCGAGACGACGCGCTGTTTCGCCCCGAGGTGCGCAAGGCCTATGCCGATCTCCTCGCGCAGGGCTGGACGGATGCGATCCGCCGTCTCCATCCCGACGAGCGGATCTACACATTCTGGAAGTATTGGCGCAATTCCTTCGAGCGCGATGCGGGCCTGCGGATCGATCATTTCCTGCTCAGCCCCGCCATCGCGCCGCGGCTGCGCTCCGCCGGCGTCCGCCGCGCGCCCAGGAGCTGGGATCACACCAGCGACCACGCGCCGGTCATGATCGAGATCGCACCGCCGGCCGACAGTTGA
PROTEIN sequence
Length: 262
MKIATYNVNGVNGRLAVLLRWLEDDAPDVVCLQELKSPNDRFPRAELERAGYGAVWHGQKSWNGVAILAKGLVPLLTRRGLPGDPDDTHSRYIEAAVDGMLVGCLYLPNGNPAPGPKFDYKLRWFQRLLAYAAELIELDVPVLLAGDYNVMPTDLEVHAPERWRDDALFRPEVRKAYADLLAQGWTDAIRRLHPDERIYTFWKYWRNSFERDAGLRIDHFLLSPAIAPRLRSAGVRRAPRSWDHTSDHAPVMIEIAPPADS*