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SCNpilot_expt_1000_bf_scaffold_3269_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2..370)

Top 3 Functional Annotations

Value Algorithm Source
Peptide ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EG02_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 122.0
  • Bit_score: 203
  • Evalue 1.60e-49
Peptide ABC transporter permease {ECO:0000313|EMBL:ESW59179.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 122.0
  • Bit_score: 203
  • Evalue 2.20e-49
binding-protein-dependent transporters inner membrane component; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 121.0
  • Bit_score: 173
  • Evalue 5.50e-41

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Taxonomy

Rhodobacter sp. CACIA14H1 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGTCTGTTTCCGGTGCCTGGCAACGCCTTCCGAGGCCGTTGCGGATCGTCCTTTCGCGTCTGCCGATGATCGTGCCGCAGATGCTGGGCGTGATCTTCGTCACATTCATGCTGGTGCGCCTTCTGCCCGGCGACCCCACGCTGCTGATGCTTGGCAACATGGCGACGCCCGAAAGCATCGCCAACCTTCGCGAACAGCTCGGCCTGAACGGAACGCTCTGGGAGCAGTTTCTCAGCTACATGGGCAATGTCATGCACGGCGATCTCGGCATTTCGCTGTTCACCTCCAACCCCGTCGCCACCGACCTCATGGACCGCGCCCCGGCGACGCTCGAACTGATCTTCTATTCCATGCTGCTGACGCTGGCG
PROTEIN sequence
Length: 123
MSVSGAWQRLPRPLRIVLSRLPMIVPQMLGVIFVTFMLVRLLPGDPTLLMLGNMATPESIANLREQLGLNGTLWEQFLSYMGNVMHGDLGISLFTSNPVATDLMDRAPATLELIFYSMLLTLA