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SCNpilot_expt_1000_bf_scaffold_3269_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2275..3024

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator {ECO:0000313|EMBL:AJE48763.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 221.0
  • Bit_score: 287
  • Evalue 1.40e-74
GntR family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGT1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 223.0
  • Bit_score: 281
  • Evalue 9.30e-73
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 215.0
  • Bit_score: 193
  • Evalue 1.00e-46

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Taxonomy

Celeribacter indicus → Celeribacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGAAGGAACAGGCCGGAAGGCTGCGGCGGATCCCGGTAAAGACGCAGGCAGCCTGAAGAGGATCCACGGCTACACGGAAATGGAGGTCACCCGGAAACTGATCCTGGCGATCTTCGAGCAGCGCCTGCCCCCGGGGCTGCGGATCACCGAGGCGCAGCTCTCGGAAGCCTTCGACGTCAGCCGCACCGTGGTGCGCCAGTCGATCGCCAAGCTCTCGGAGATCGGCGTCTTCAAGAAGACCCCGAACCAGGGATGCACCATCGCCTCTCCCAACCGCGACGAGGCCCGCAAGATGCTTCACGTCCGCGAGATGGTCGAGCCCGCGATGGTGCGCGGCATTGCCGAGACCCGGACGCCGGAGCACCTGGCGGCGCTGCACGAGCATATCGCCATGGAAGGCGAAGCCCGCCTGCGGCAGGACCGCTCCACCCTCGTCCGGCTGAGCGGGGAGTTCCATCTCAAGCTCGCGGAAATGACGGGCAATCCGTATCTCATCCGCCTCATGACGGAGCTCCAGGTGCTGACCTGCCTTGCCATCCTCGTGCATGCCGAGGCGGAAACCGGCTGCCCGCGCGACGAGCATAGCGCCATCGTCGCGGCGATCGAGCGAGGCGACGGCGAAGCGGCCAGCCACGAGATGGCGCACCACCTCAAGCACATCACCGCCGACCTCAAGCTCGACCGCGCCGAGCCGGAACCGAACCTGGAGAACGCCATGCTCTGGCTGCGGGGCGCCGCCGGTGCCTGA
PROTEIN sequence
Length: 250
MEGTGRKAAADPGKDAGSLKRIHGYTEMEVTRKLILAIFEQRLPPGLRITEAQLSEAFDVSRTVVRQSIAKLSEIGVFKKTPNQGCTIASPNRDEARKMLHVREMVEPAMVRGIAETRTPEHLAALHEHIAMEGEARLRQDRSTLVRLSGEFHLKLAEMTGNPYLIRLMTELQVLTCLAILVHAEAETGCPRDEHSAIVAAIERGDGEAASHEMAHHLKHITADLKLDRAEPEPNLENAMLWLRGAAGA*