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SCNpilot_expt_1000_bf_scaffold_3269_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 12539..13087

Top 3 Functional Annotations

Value Algorithm Source
Gluconate 2-dehydrogenase, membrane-bound, gamma subunit n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3ART4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 182.0
  • Bit_score: 241
  • Evalue 6.00e-61
Gluconate 2-dehydrogenase, membrane-bound, gamma subunit {ECO:0000313|EMBL:GAD57443.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 182.0
  • Bit_score: 241
  • Evalue 8.40e-61
twin-arginine translocation pathway signal; K06152 gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 175.0
  • Bit_score: 210
  • Evalue 3.60e-52

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Taxonomy

Loktanella cinnabarina → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGCGCGCCATCAGCGCGCGCCTGATCCCGTCGGACGACACCGGCCCGGGCGCCGACGAGGCCGACGTCGTCACCTTCATCGACCGGCAGCTTGCCGGCTTTTATGGCCGCGGCGAACGCTGGTACATGAAGGGGCCTTTCTCCGAGGGCACGGACGAGCAGGGATACCAATCCGAAAGCCCGCCGGCCGGGCTTTACCGCAAGGCGCTCGCCGCACTCGACGCGCACTGTCGCGGGAGCCATGACGGAAAGGCGTTCGACGAGCTCGACGCCGGGGTGCAGGACGACATCCTCGCCGCGATGGAGGACGGCGAGCTCGAATTCGAGGGCGTCGCGGCGCCGGCCTTCTTCGCGCTTGTTCTCGAAAACACCATCGAGGGCTTCTTCAGCGATCCGATCTATGGCGGCAACCGGGACATGGCAGGCTGGCGGCTCGTCGGCTTTCCCGGCGCGCGCTACGACTACCGCGACTATCTCGACCATGACGGCAAGCGCCTCGACATCCCTCCCGTCGGTCTTGCCGGACGACCGGAGTGGAAAACCCCATAA
PROTEIN sequence
Length: 183
VRAISARLIPSDDTGPGADEADVVTFIDRQLAGFYGRGERWYMKGPFSEGTDEQGYQSESPPAGLYRKALAALDAHCRGSHDGKAFDELDAGVQDDILAAMEDGELEFEGVAAPAFFALVLENTIEGFFSDPIYGGNRDMAGWRLVGFPGARYDYRDYLDHDGKRLDIPPVGLAGRPEWKTP*