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SCNpilot_expt_1000_bf_scaffold_25194_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3..1913

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 638.0
  • Bit_score: 1186
  • Evalue 0.0
Protein translocase subunit SecA n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZG2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 637.0
  • Bit_score: 1070
  • Evalue 0.0
  • rbh
secA; protein translocase subunit secA; K03070 preprotein translocase subunit SecA similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 634.0
  • Bit_score: 1068
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
AAGCTGGAGAACCTGCTGCGCCAGGCCGGCCTTCTCAAGGGCGAGTCGCTCTACGACGTCGAGAACGTCGCCATCGTCCACCACATCAACAACGCGCTGAAGGCCCACAAGCTCTTCGCCCGCGACAAGGACTACATCGTCCGCAACGACGAGATCGTCATCATCGACGAGTTCACCGGCCGCATGATGCCGGGCCGCCGCTATTCGGAAGGCCAGCACCAGGCGCTCGAAGCCAAGGAAAAGGTGACGATCCAGCCGGAAAACCAGACGCTGGCCTCAATCACCTTCCAGAACTATTTCCGCATGTACTCCAAGCTCGGCGGCATGACGGGCACGGCCTCGACGGAAGCCGAGGAATTCGGCAACATCTACGGCCTCGAGGTCGTGGAAGTGCCGACCAACCTGCCGATCCAGCGCCTCGACGAGGACGACGAGGTCTACCGGACGGCGGAAGAGAAGTACAAGGCGATCATCGAGGAGATCAAGGCGTCCCGCGAGAAGGGCCAGCCTGTCCTCGTCGGCACGACCTCGATCGAGAAGTCCGAGCTTCTGGCCGAACTGCTCAAGAAGTCCGGCTTCAAGGATTTCCAGGTCCTCAACGCCCGCTACCACGAGCAGGAAGCCTATATCGTCTCGCAGGCAGGCGTACCGGGTGCGGTCACCATCGCCACCAACATGGCCGGCCGCGGCACCGACATCCAGCTCGGCGGCAATGTCGACATGCGGCTGGAGCGCGAGCTCGCCGAAATGGAACCGGGTCCCGAGCGCGATGCCAAGCGCGAAGCGATCGTCGCCGAGGTCAGGCAGCTCAAGGAGAAGGCGCTCGCCGCCGGCGGCCTCTACGTGCTTGCCACCGAGCGCCATGAAAGCCGCCGCATCGACAACCAGCTTCGCGGCCGTTCGGGCCGCCAGGGCGACCCGGGCCGCTCGAAGTTCTTCCTGTCGCTGCAGGACGACCTGATGCGCATCTTCGGCTCCGAGCGCATGGACTCGATGCTCCAGAAGCTCGGCCTCAAGGAGGGCGAGGCCATCGTCCATCCCTGGATCAACAAGGCGCTGGAGCGCGCGCAGAAGAAGGTCGAAGCCCGCAACTTCGACATCCGCAAGAACCTCCTGAAATACGACGACGTGCTCAACGACCAGCGCAAGGTCATCTTCGAGCAGCGCATCGAGCTGATGGACGGCGACAACCTCTCCGAGATCGTCGGCGACATGCGCCAGGAAGTGGTCGAAAACCTCGTGCGCCTGCACATCCCGGAAAATGCCTATGCGGAGCAGTGGGATGTCGCGGGCCTCAAGCAGGGCGTTCTCGACCAGCTCAATCTCGACCTGCCGATCGAGGCCTGGGCGGCCGAGGAAGGCATCGACGAGAAGGACATCCTGGAGCGGCTGAAGGCGGCGGCCGACGAGGCCGCGCGCGATCGCGCGGAACGCTTCGGTCCCGAGATCATGGCCTATGTCGAGCGCTCGGTCCTGCTCCAGACGCTGGACCATCTGTGGCGCGAGCACATCGTCAACCTCGACCACCTGCGCTCGGTCATCGGCTTCCGCGGCTATGCCCAGCGCGATCCGCTGCAGGAATACAAGGCCGAGGCCTTCGAGCTGTTCCAGGCGCTGCTGGCGAACCTGCGCCAGACCGTCACCGCGCAGCTCATGCGCGTCGAGCTGGTGCGCCAGGCCGCCGATGCCCCGGTGCCGGCGCCGCCGGCCATGGAAGGCCATCATATCGACGGGACCACCGGCGAGGACGATTTCGGCGAGGGCAACGGTTTCGCGGCCACGGCCGTCGAGCCGGAAGACCGCGACCCGAACGATCCTGCGACCTGGGGCCGCGTTGCGCGCAACGAGCCGTGCCCCTGCGGTTCGGGCAAGAAATACAAGCATTGCCACGGCGCCTTCGAGCAGGTCTAG
PROTEIN sequence
Length: 637
KLENLLRQAGLLKGESLYDVENVAIVHHINNALKAHKLFARDKDYIVRNDEIVIIDEFTGRMMPGRRYSEGQHQALEAKEKVTIQPENQTLASITFQNYFRMYSKLGGMTGTASTEAEEFGNIYGLEVVEVPTNLPIQRLDEDDEVYRTAEEKYKAIIEEIKASREKGQPVLVGTTSIEKSELLAELLKKSGFKDFQVLNARYHEQEAYIVSQAGVPGAVTIATNMAGRGTDIQLGGNVDMRLERELAEMEPGPERDAKREAIVAEVRQLKEKALAAGGLYVLATERHESRRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSERMDSMLQKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKNLLKYDDVLNDQRKVIFEQRIELMDGDNLSEIVGDMRQEVVENLVRLHIPENAYAEQWDVAGLKQGVLDQLNLDLPIEAWAAEEGIDEKDILERLKAAADEAARDRAERFGPEIMAYVERSVLLQTLDHLWREHIVNLDHLRSVIGFRGYAQRDPLQEYKAEAFELFQALLANLRQTVTAQLMRVELVRQAADAPVPAPPAMEGHHIDGTTGEDDFGEGNGFAATAVEPEDRDPNDPATWGRVARNEPCPCGSGKKYKHCHGAFEQV*