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SCNpilot_expt_1000_bf_scaffold_18631_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4256..5050)

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis protein CheY {ECO:0000313|EMBL:KGF69425.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 231.0
  • Bit_score: 373
  • Evalue 2.70e-100
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C195CC similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 231.0
  • Bit_score: 363
  • Evalue 2.00e-97
  • rbh
transcriptional regulator (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 228.0
  • Bit_score: 350
  • Evalue 4.20e-94
  • rbh

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Taxonomy

Hoeflea sp. BAL378 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCAGGTTGTATGGAGATTGCGTGGAGACGTGCCGTTCCGGGTTGACGCCGACAATGGCGATGCACTCTTTAGGAAGAACACAGCCGGGGGCGATGTCATGGACAATCCGCTGATCCTTATCGTCGAGGACGAGCCAGAAATCGCGGACATACTGGAAACCTATTTCGTCCGGGAGGGCTTCCGTACCGTCAGCGCCGGCGACGGGTCGATCGGGCTTGCACATTACGTCCGGCTCCGGCCCGACCTGATCGTCCTCGATATAAAGCTGCCCGGCCAGGACGGCTATGACGTCTTGGCCGCCATTCGCAGGCGCGACGACACGCCGGTCATCATGGTGACGGCGCTGGCCGAGGATCTCGACAAGCTGCAGGCCCTGCGGATCGGCGCGGACGACTATGTCGTCAAGCCGTTCAATCCGCTGGAGGTCGTCGCCCGGGCCAAGGCCGTGCTGCGCCGCACGACAGGGCGCAAGGGAAGACAGCCGCTGCGTATCGGGCCGCTGACCATCGATCCCGACGCCTATATCGCAACGGTCGGGCAAGGCGCAGGCGAGGCGACGCTGGAACTGACGCGCACGGAATTCCGGCTGCTTGCCTATATGGCGGCCNNNNNNNNNNNTGTCTTCGAGCGTTCCGAGCTCGTCGATGCGTGCCTTCCGGAAGGAGAAGCGCTCGATCGCACCGTCGACAGCCATGTCAGCAACCTCAGGCGCAAACTGACCGCCGCCGGCGCCGATGGATTGCTGACGGGTGTCCGCGGCGTGGGTTACCGGCTGGCGGATCGCCATGGCTAG
PROTEIN sequence
Length: 265
MQVVWRLRGDVPFRVDADNGDALFRKNTAGGDVMDNPLILIVEDEPEIADILETYFVREGFRTVSAGDGSIGLAHYVRLRPDLIVLDIKLPGQDGYDVLAAIRRRDDTPVIMVTALAEDLDKLQALRIGADDYVVKPFNPLEVVARAKAVLRRTTGRKGRQPLRIGPLTIDPDAYIATVGQGAGEATLELTRTEFRLLAYMAAXXXXVFERSELVDACLPEGEALDRTVDSHVSNLRRKLTAAGADGLLTGVRGVGYRLADRHG*