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SCNpilot_expt_1000_bf_scaffold_18007_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1001..2071

Top 3 Functional Annotations

Value Algorithm Source
dTDP-glucose 4,6-dehydratase AcbB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZT9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 356.0
  • Bit_score: 616
  • Evalue 2.30e-173
  • rbh
dTDP-glucose 4,6-dehydratase AcbB {ECO:0000313|EMBL:EYR83408.1}; EC=4.2.1.46 {ECO:0000313|EMBL:EYR83408.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 356.0
  • Bit_score: 616
  • Evalue 3.20e-173
MUM4 (mucilage-modified 4) similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 312.0
  • Bit_score: 221
  • Evalue 3.90e-55

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGCCTCGCTCGCCCTCGACCGGATCCGCACCATCGTCGTGACCGGTGGCGCCGGCTTCGTCGGCTCGCACATCGTCGACGACCTCCTGGTGCATTGCCCGGATGCCCGCATCCGCGTGCTCGACGCCTTTACCTATGCCGCCGACATGTCCCATCTCGACGCCGCCTTCCGCACGGGCCGCGTGACGATCCAGCAGGGCGACGTCGGCAATCTCGACCTCGTGACGGAGATGCTCAGGGACGCCGACCTCGTCGTGCACGCGGCCGGCGAAAGCCATGTCGAGCGCGCTTTCTCGGCGCCGGAACGCTTCACGGTCGCCAATGCGCTCGGCACCCAGGTGCTCGTCGAGGCGATGGGCCGGCGCCGCGTGCCGCTGATGATCCATGTCGGCACCGCGGAGGTCTATGGCGCCGGCACGGGCGAGCCGGCCGGCGAGCGCGCGCCGCTCCTGCCGGACAATCCCTACGGCGCCTCCAAGGCGGCCGCCGAGATGCTGATCGCCGGCCTTCGCCGCTCCTTCGGCCTCGACATCCGCGTGCTGCGCCCGGTCAATATCGTCGGCACGCGCCAGAATGCGGAGAAGCTGCTGCCGCGCTTCCTGGAAATGGCGGCCGTCGGCCGCCCGCTGCCGGTGCACGGCGACGGATTGCAGATGCGCGCCTTCGTGACGATGGCGGACTTCTGCTCGGCGCTGAGGACCGTCGTCACGCACGGCGCGGAGAACGCCACCTACAACGTGGCGGGAGACGACCTCTACGACATCCTCTCCATCGCCCGCATGGTGCTCGACGCCGTGCAGGATCCGGTTGCCGGCGTCACCTTCACCGGCGGCCGGCCGGACAATGCCAGCCGCCCGCCGGTCGACACCGCCGCGCTGAGGGCGCTCGGCTGGCAACCGAAGGGCACGCTTCGCGGCGAACTGCCCGCCCTTGCGGCATGGTACGCCGCCCGCGTGCCGGGCGGCACGCGCCGCCGGCTCCGGCAGGTGCCCGGCCTTGCGCCGCAGCGCGTGCAGGCCGTCACCCAGGCGGCGGGCTCCGGGCTCTTCCGCTCGCTCGAACGGCATTGA
PROTEIN sequence
Length: 357
MASLALDRIRTIVVTGGAGFVGSHIVDDLLVHCPDARIRVLDAFTYAADMSHLDAAFRTGRVTIQQGDVGNLDLVTEMLRDADLVVHAAGESHVERAFSAPERFTVANALGTQVLVEAMGRRRVPLMIHVGTAEVYGAGTGEPAGERAPLLPDNPYGASKAAAEMLIAGLRRSFGLDIRVLRPVNIVGTRQNAEKLLPRFLEMAAVGRPLPVHGDGLQMRAFVTMADFCSALRTVVTHGAENATYNVAGDDLYDILSIARMVLDAVQDPVAGVTFTGGRPDNASRPPVDTAALRALGWQPKGTLRGELPALAAWYAARVPGGTRRRLRQVPGLAPQRVQAVTQAAGSGLFRSLERH*