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SCNpilot_expt_1000_bf_scaffold_18007_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2918..3106

Top 3 Functional Annotations

Value Algorithm Source
Glycine--tRNA ligase alpha subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQR4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 62.0
  • Bit_score: 111
  • Evalue 3.20e-22
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 62.0
  • Bit_score: 111
  • Evalue 4.50e-22
glyQ; glycyl-tRNA synthetase subunit alpha; K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 61.0
  • Bit_score: 109
  • Evalue 3.80e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
GTGCTGCCCGCCTACGACCAGTGCATCAAGGCCTCGCATATCTTCAACCTGCTGAATGCACGCGGCGTCATCTCCGTGACGGAGCGCGAGCGCTACATCGCGCGCGTCCGCGTGCTGGCCAAGGAATGCGGCGAGGCCTTCCTGCTGACGGATGCGGGCGGCGCGAACTGGGCGAAGGACGCGGCCTGA
PROTEIN sequence
Length: 63
VLPAYDQCIKASHIFNLLNARGVISVTERERYIARVRVLAKECGEAFLLTDAGGANWAKDAA*