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SCNpilot_expt_1000_bf_scaffold_11016_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7530..8192)

Top 3 Functional Annotations

Value Algorithm Source
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 220.0
  • Bit_score: 401
  • Evalue 5.90e-109
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 220.0
  • Bit_score: 395
  • Evalue 9.40e-108
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JW79_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 220.0
  • Bit_score: 395
  • Evalue 3.00e-107

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ACCATCGCCAAGCGCCTGCAGGAATCCAAGCAGACGATCCCGCACTTCTACGTGTCGGTCGACGTTGAGCTCGACGCGCTGCTGGCGCTGCGCGCCCAGCTCAACGACAGCGCACCGCGCAAGGAAGACAAGCCGGCCTACAAGCTCTCGGTCAACGACATGGTGATCAAGGCCATGGCGCTCGCGCTGCGCGACGTGCCGGATGCCAACGTCTCCTGGACCGAGACGAACATGGTCAAGCACAAGCACGCGGATGTCGGCGTCGCCGTCTCCATTCCGGGCGGCCTGATCACGCCGATCATCCGCAAGGCCGAGACCAAGACGCTGTCGGCCATCTCCAACGAGATGAAGGACCTCGGCAAGCGCGCCAAGGAACGCAAGCTGAAGCCCGAGGAATACCAGGGCGGCACGACCGCCGTCTCCAACATGGGCATGATGGGGGTCAAGAACTTCGCCGCCGTCGTCAACCCGCCGCATGCGACGATCCTGGCGGTCGGCGCGGGCGAGGAGCGGGTCGTGGTCAAGGGCGGCGAGATCAAGATCGTCAACGCCATGACCGTGACGCTCTCCACTGACCATCGCTGCGTCGATGGCGCGCTCGGCGCCGAGCTTCTCGGGGCCTTCAAGCGCTACATCGAAAATCCGATGGGCATGCTCGTCTGA
PROTEIN sequence
Length: 221
TIAKRLQESKQTIPHFYVSVDVELDALLALRAQLNDSAPRKEDKPAYKLSVNDMVIKAMALALRDVPDANVSWTETNMVKHKHADVGVAVSIPGGLITPIIRKAETKTLSAISNEMKDLGKRAKERKLKPEEYQGGTTAVSNMGMMGVKNFAAVVNPPHATILAVGAGEERVVVKGGEIKIVNAMTVTLSTDHRCVDGALGAELLGAFKRYIENPMGMLV*