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SCNpilot_expt_1000_bf_scaffold_17545_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(477..1166)

Top 3 Functional Annotations

Value Algorithm Source
3-oxoadipate CoA-transferase subunit B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CID1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 229.0
  • Bit_score: 443
  • Evalue 1.70e-121
  • rbh
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EYR83643.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EYR83643.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 229.0
  • Bit_score: 443
  • Evalue 2.40e-121
Coenzyme A transferase; K01032 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 229.0
  • Bit_score: 435
  • Evalue 1.10e-119
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACCGTCGATACGCATGAGGACATCAAGCTTTCCAATGCCCAGATCGCCTGGCGCGCGGCGCAGGACATCGCCGACGGCGCCTATGTGAACCTCGGCATCGGCTTTCCCGAGATGGTGGCGCGCTACCAGCCCGAGGGACGCGCGGCGATCTTCCACACGGAGAACGGCATCCTCGATTTCGGCGAGGCCCCGCCGCCGGGCGAGGAGGACTGGGACCTGATCAATGCCGGCAAGAAGGCGGTCACGCTGAAGCCGGGCTCCGCCTTCTTCCACCATGCCGATAGCTTCGCCATGGTGCGCGGCGGCCATCTCGACGTCGCCATCCTCGGCGCCTACCAGGTGGCGGAAAATGGCGACCTCGCCAACTGGCGCGTCGGCTCCAGGGGCGTGCCGGCCGTCGGCGGGGCGATGGATCTCGTGCACGGCGCCAGGGAGGTGGTCGTCATCACCGAGCACGTCACCAAGAACGGCGAGCCGAAGCTGGTCGAGCGCTGCACCTTCCCGCTCACCGGCGTCGGCTGCATCACCCGGATCTATACGAGTCACGCCGTCGTCGACGTCTGCGATGGTCGTTTCGTGCTGCGCGAGAAGCTCGCCGGCATGACGGTCGAGGACCTGCAGGCGATGACCGGGGCGAAGCTGCATGTCGAAGGCCCGGTCGCCGATCTCGTCGTGCCGGAACTGTGA
PROTEIN sequence
Length: 230
MTVDTHEDIKLSNAQIAWRAAQDIADGAYVNLGIGFPEMVARYQPEGRAAIFHTENGILDFGEAPPPGEEDWDLINAGKKAVTLKPGSAFFHHADSFAMVRGGHLDVAILGAYQVAENGDLANWRVGSRGVPAVGGAMDLVHGAREVVVITEHVTKNGEPKLVERCTFPLTGVGCITRIYTSHAVVDVCDGRFVLREKLAGMTVEDLQAMTGAKLHVEGPVADLVVPEL*