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SCNpilot_expt_1000_bf_scaffold_26477_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3..944

Top 3 Functional Annotations

Value Algorithm Source
UDP-glucose 4-epimerase ExoB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUC9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 313.0
  • Bit_score: 586
  • Evalue 1.70e-164
  • rbh
UDP-glucose 4-epimerase ExoB {ECO:0000313|EMBL:EYR83376.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EYR83376.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 313.0
  • Bit_score: 586
  • Evalue 2.40e-164
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 311.0
  • Bit_score: 493
  • Evalue 4.70e-137
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
TGGGCACTGGTCGATGCCGGCGAGGAGGTCGTGGTGCTCGACCGGCTTTCCACCGGCTTCCGCTGGGCCGTGGCGCCAGAGGCCCGCTTCTACCAGGGCGACATCGCCGATGCCGCGCTGCTGGGGCAGATCTTCGCCGAGAACCGCATCGAGGCGATCATCCATTTCGCCGGCTCGATCATCGTGCCGGAATCGGTCGCCGACCCCCTCGCCTATTACGAGAACAACACGGTCAAGTCACGCGCGCTCATCGCCGCCGCCGTCGCGGCGAAGGTGCCGCATTTCGTCTTCTCCTCCACCGCCGCCGTCTACGGCACGCCCGACGGCACGGAACCGGTGCTGGAGTCCGCCGCGCTCCGGCCCGAATCGCCCTACGGCTCCTCCAAGCTGATGACCGAGATCATGCTGCGCGACACCGCCGCCGCGCATGACTTCACCTATACGGCGCTGCGCTATTTCAACGTGGCCGGCGCCGATCCGCGCGGGCGCACCGGCCAGTCGACCAGGGGCGCCACCCATCTCATCAAGGTGGCGAGCGAGGCCGCGCTCGGCAAGCGGGCCGGCATGGACGTCTACGGCACGGACTACCCGACGCCGGACGGCACCTGCATTCGCGACTATATCCACGTCTCCGACCTTGCCAATGCACATCTGAAGGCCCTGCAGCGCATGCGGGCGGGCGGCGGCTCGATCGTCGCCAATTGCGGTTATGGCCGCGGCTTCTCGGTGCTGGAGGTGCTGGACGAGGTCAAGGCCGCCTCGGGCGTGGATTTCCCGGTGCGCTTTGCCGGTCGGCGGCCGGGCGACGCGGTGCTCATCGTCGCCAATCCCTCGGTCGCGATGAAGGAACTCGGCTGGACGCCCGAACACGACGACCTTGCCTTCATCGTGCGCACCGCGCTCGACTGGGAGGATCATCTCGGCCGGCGCAACCAGCTCTGA
PROTEIN sequence
Length: 314
WALVDAGEEVVVLDRLSTGFRWAVAPEARFYQGDIADAALLGQIFAENRIEAIIHFAGSIIVPESVADPLAYYENNTVKSRALIAAAVAAKVPHFVFSSTAAVYGTPDGTEPVLESAALRPESPYGSSKLMTEIMLRDTAAAHDFTYTALRYFNVAGADPRGRTGQSTRGATHLIKVASEAALGKRAGMDVYGTDYPTPDGTCIRDYIHVSDLANAHLKALQRMRAGGGSIVANCGYGRGFSVLEVLDEVKAASGVDFPVRFAGRRPGDAVLIVANPSVAMKELGWTPEHDDLAFIVRTALDWEDHLGRRNQL*