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SCNpilot_expt_1000_bf_scaffold_10066_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1502..2275

Top 3 Functional Annotations

Value Algorithm Source
Putative short chain dehydrogenase adh_short {ECO:0000313|EMBL:AHK46173.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 257.0
  • Bit_score: 441
  • Evalue 6.00e-121
Short chain dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3M7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 257.0
  • Bit_score: 432
  • Evalue 2.60e-118
  • rbh
smoS; short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 257.0
  • Bit_score: 424
  • Evalue 2.20e-116
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGACGGATGCTGCCCCCCAGATTGATCTCAATTTCCCGCTTGCGGGCAAGGTGGCCCTGGTAACCGGTGGGGCTTCGGGCATCGGCGCGGCCATGGCTGAAGCCTTCGCCGGCAAGGGAGCGCGGGTCGCCGTTCTCGATATCAACGAGGAGGCCGCGCGTGCACAGGCGGGCCGTCTGGCGGGCGACGCCAGGCCCTTCGTCTGCGACGTGTCCGATCCCAAATCGGTCAACGCCGCCGTTTCGGGCGCGCTGTCGGCGTTTGGCAGCATCGATATCGCCGTCAACAGCGCCGGCGTCGTCTTCCTTGCACCTGCCGAGGATTTGCCGCTCGACTATTGGGACAGGACGATCGACATCAATCTCAAGGGGAGTTTCCTCGTGACGCAGGCCGTCGGCCGGGCGATGATCGCGGCCGGCAAGGGCGGAAAGATTATCAACCTCGCTTCGCAAGCGGGCACGGTGGCCATCGAGGAACACGTCGCCTATTGCGCATCCAAGTTTGGAGTCATCGGCATGTCGAAGACCTTCGCCGCCGAGTGGGGCAAGCATGGTATCTGCGTCAACACGTTGTCTCCGACGATCGTTCTGACGGAACTCGGCAAGAAAGCCTGGAGCGGGGAGAAGGGGGAGGCGGCGAGGAAGCGCATTCCCGCGGGACGCTTCGCCTATCCGGGAGAGATTGCCGCCGCCGCCGTGTTCCTCGCATCCGCCGGGGCGGACATGATCAACGGCGCCGATCTTCTGATCGACGGCGGCTACACGATCCTCTGA
PROTEIN sequence
Length: 258
MTDAAPQIDLNFPLAGKVALVTGGASGIGAAMAEAFAGKGARVAVLDINEEAARAQAGRLAGDARPFVCDVSDPKSVNAAVSGALSAFGSIDIAVNSAGVVFLAPAEDLPLDYWDRTIDINLKGSFLVTQAVGRAMIAAGKGGKIINLASQAGTVAIEEHVAYCASKFGVIGMSKTFAAEWGKHGICVNTLSPTIVLTELGKKAWSGEKGEAARKRIPAGRFAYPGEIAAAAVFLASAGADMINGADLLIDGGYTIL*