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SCNpilot_expt_1000_bf_scaffold_7521_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1995..2279

Top 3 Functional Annotations

Value Algorithm Source
Sarcosine oxidase delta subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F030_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 94.0
  • Bit_score: 184
  • Evalue 5.90e-44
Sarcosine oxidase delta subunit {ECO:0000313|EMBL:EYR81548.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 94.0
  • Bit_score: 184
  • Evalue 8.30e-44
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1] similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 89.0
  • Bit_score: 123
  • Evalue 3.90e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCAGCTTTTCCCATGCCCCTTCTGCGGCCCGCGCAGCGAGAGCGAATTCCACTTCGGCGGCGACGCCGGCAACCACCGCCCGGAAGGCTTCCGCGACGTGACGGACGGCGAATGGACCGCCTACCTTTACGAGCGCAACAACCCGCGCGGCGCGGCAAGCGAGATCTGGATGCACATGACCTGCGGCGAGGTGTTCCGCATGGAGCGCGACACCGTGCACCACGGCGTTGCGCGCTCCTTTGCACTGATGGAAGGAGGCGGCGATGACGGCCTGGCGCACTGA
PROTEIN sequence
Length: 95
MQLFPCPFCGPRSESEFHFGGDAGNHRPEGFRDVTDGEWTAYLYERNNPRGAASEIWMHMTCGEVFRMERDTVHHGVARSFALMEGGGDDGLAH*