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SCNpilot_expt_1000_bf_scaffold_10458_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3744..4427)

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit D n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVY4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 227.0
  • Bit_score: 468
  • Evalue 4.90e-129
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 227.0
  • Bit_score: 468
  • Evalue 6.90e-129
NADH dehydrogenase subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 227.0
  • Bit_score: 454
  • Evalue 1.80e-125

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGGAAGACATCGGCAAGTGGATCGACCCGTTCCTGAAGACCGTCGACGACATCGACGAGCTGCTCACAGGCAACCGCATCTTCAAGCAGCGCAACGTCGATATCGGCGTCGTGAAGCTGGAAGACTGCTGGGCCTGGGGCTTCTCGGGCGTCATGGTGCGCGGTTCGGGCGCTGCCTGGGACCTGCGCCGCTCGCAGCCCTACGAGTGCTATTCCGACCTCGACTTCGACATTCCGATCGGCAAGAACGGCGACTGCTACGACCGTTACGTCATCCGCATGATCGAGATGCGCGAATCCGCCAAGATCATGCGCCAGTGCGTCGACCGCCTGCTCGGCGACGCCAAGGTCGGCCCGGTCTCCTCGATCGACGGCAAGATGGTTCCGCCGAAGCGCGGCCAGATGAAGCGCTCGATGGAAGCGCTGATCCATCACTTCAAGCTCTATACGGAAGGCTACCATGTGCCGGCCGGTGAAGTGTATGCGGCCGTGGAAGCGCCGAAGGGCGAGTTCGGCGTCTACCTCGTCGCCGACGGCACCAACAAGCCCTACCGCTGCAAGATCCGCGCGCCGGGCTATGCCCACCTTCAGGCCATGGACTTCATCTGTCGCGGCCACCAGCTTGCCGACGTCTCGGCGATCCTGGGCTCCCTCGACATCGTGTTCGGCGAGGTTGACCGCTGA
PROTEIN sequence
Length: 228
VEDIGKWIDPFLKTVDDIDELLTGNRIFKQRNVDIGVVKLEDCWAWGFSGVMVRGSGAAWDLRRSQPYECYSDLDFDIPIGKNGDCYDRYVIRMIEMRESAKIMRQCVDRLLGDAKVGPVSSIDGKMVPPKRGQMKRSMEALIHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVADGTNKPYRCKIRAPGYAHLQAMDFICRGHQLADVSAILGSLDIVFGEVDR*