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SCNpilot_expt_1000_bf_scaffold_11319_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4773..5207)

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037CC607 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 144.0
  • Bit_score: 289
  • Evalue 2.00e-75
putative transposase for insertion sequence NGRIS-12c similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 144.0
  • Bit_score: 283
  • Evalue 3.40e-74
Putative transposase for insertion sequence NGRIS-12a {ECO:0000313|EMBL:ACP24137.1}; Putative transposase for insertion sequence NGRIS-12c {ECO:0000313|EMBL:ACP25564.1}; Putative transposase for insertion sequence NGRIS-12d {ECO:0000313|EMBL:ACP25168.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 144.0
  • Bit_score: 283
  • Evalue 1.50e-73

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGACGAACGCTCGCAATCACACGCGACGTGGGACTGCAAATATCATGTGGTCTTCGCGAGTAAGTACCGAACGAAGCGCCTTTACGGGGACGTAAGGCGTGAGTTGGGTGATCTGCTACATAATCTTGCTCGACAAAAGGGATGCGAGATCAGGGAAGGGCACTTGATGCCCGACCATATGCACATGCTGATATTGATCCCGCCGAAATACTCGGTGTCCTCGATTGTCGGCTTTTTGAAAGGCAAGACGGCCCTTTATGTGGCCAACAAATATGCCCGCAAGCGGCGCTACAAAGGCTATCACTTTTGGGCGCGTGGGTACTTCGTCTCTACGGCTGGCTATGATGAGCAGGTCGTCAGACGTTATATCCGTAATCAGGAAAAGGCCGACAAAGCTTCCGACTTTGCCGACCTGTTTAATCGTAGCTACTAA
PROTEIN sequence
Length: 145
MDERSQSHATWDCKYHVVFASKYRTKRLYGDVRRELGDLLHNLARQKGCEIREGHLMPDHMHMLILIPPKYSVSSIVGFLKGKTALYVANKYARKRRYKGYHFWARGYFVSTAGYDEQVVRRYIRNQEKADKASDFADLFNRSY*