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SCNpilot_expt_1000_bf_scaffold_4680_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3..149)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5K6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 48.0
  • Bit_score: 86
  • Evalue 6.60e-15
Response regulator {ECO:0000313|EMBL:EYR79853.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 48.0
  • Bit_score: 86
  • Evalue 9.30e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 147
GTGGGAGGTTCGGCTAGAAGGCTGATCGTCGTCGACGACGATCCGGTGGACGCGCGGTTCGTCATGCGCGCCTTCAGCGATGCCGGAAGCCCGCTCGAAATCACCCATGCCGCCGATGCCGAGGTCGCCAGCGACCGGCTCGATGCG
PROTEIN sequence
Length: 49
VGGSARRLIVVDDDPVDARFVMRAFSDAGSPLEITHAADAEVASDRLDA