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SCNpilot_expt_1000_bf_scaffold_4680_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2105..2494)

Top 3 Functional Annotations

Value Algorithm Source
FeS assembly scaffold SufA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGL4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 129.0
  • Bit_score: 241
  • Evalue 4.30e-61
FeS assembly scaffold SufA {ECO:0000313|EMBL:EYR79851.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 129.0
  • Bit_score: 241
  • Evalue 6.00e-61
FeS assembly scaffold SufA; K13628 iron-sulfur cluster assembly protein similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 129.0
  • Bit_score: 217
  • Evalue 2.70e-54

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCTTTGCAGTCATGACACTGACCGATGCGGCGGCGAACCGCGTCAAGGCAATCGTCGCCAATGCCGGCGAGGATGCCAGGGGCATCCGCGTCGGCATCAAGAAGGGCGGTTGCGCGGGCATGGAATATTCCATCGATCTCGTGACGGAGCCCAATGCCAGGGACGACCTGATCGAGCTGAACGGCGCCCGCGTCTGGGTCGCGCCGGAAGCCGTGCTCTACCTTCTCGGCACGCAGATGGATTTCGAGGTGACGACCCTGCGCTCCGGCTTCACCTTCCACAACCCGAACCAGACGTCCGCCTGCGGCTGCGGCGAATCGGTCGAGCTGAAGCCCGCCGACCTCGCGGCGCTTGCCGCCGCCGGCCAGCCGACCGTCCGCGCCTGA
PROTEIN sequence
Length: 130
MAFAVMTLTDAAANRVKAIVANAGEDARGIRVGIKKGGCAGMEYSIDLVTEPNARDDLIELNGARVWVAPEAVLYLLGTQMDFEVTTLRSGFTFHNPNQTSACGCGESVELKPADLAALAAAGQPTVRA*