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SCNpilot_expt_1000_bf_scaffold_4680_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5712..6458)

Top 3 Functional Annotations

Value Algorithm Source
Putative ATP-dependent transporter SufC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWQ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 244.0
  • Bit_score: 472
  • Evalue 3.70e-130
  • rbh
Putative ATP-dependent transporter SufC {ECO:0000313|EMBL:EYR79847.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 244.0
  • Bit_score: 472
  • Evalue 5.20e-130
sufC; ABC transporter involved in Fe-S cluster assembly, ATP-binding protein; K09013 Fe-S cluster assembly ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 244.0
  • Bit_score: 458
  • Evalue 1.00e-126
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
CCTGCACGCCCGCACGCCCGCATCGCCGAAGACGGCACCGAGATCATCCGCGGCCTGAACCTCACCGTGAAGGCCGGCGAAGTCGCCGCCATCATGGGCCCGAACGGCTCCGGCAAGTCGACGCTCTCCTACATCCTCTCCGGCCGCGAGGACTACGAGGTCACCGAGGGCGACATCCTCTACAATGGCGAGAGCATCCTGGAGCTCGACCCGGCCGAGCGCGCCGCCAAGGGCATCTTCCTCGCCTTCCAGTACCCGGTCGAAATCCCGGGCGTCGCCACCATGCAGTTCCTCAAGGTCGCGATGAACGAGCAGCGCAAGGCGCGCGGTGAGGCCGAGCTGACGACGCCGGACTTCATGCGCCGCGTCAAGGAAGCTTCCGCCGAACTCAAGATCGCGCCGGAAATGCTGCGCCGTCCGCTCAACGTCGGCTTCTCCGGCGGCGAGAAGAAGCGCGCCGAGATCCTGCAGATGTCGCTGCTGGAGCCGAAGCTGTGCATCCTCGACGAGACCGATTCCGGCCTCGACATCGACGCGCTGAAGATCGTCGCGGACGGTGTCAACGCGCTGCGCTCGCCGGACCGCGCCGTCGTCGTCATCACGCACTACCAGCGCCTGCTCGACTATATCGTGCCGGATACGGTCCACGTCCTCTACAAGGGCCAGGTCATCAAGTCCGGCGACAAGACGCTGGCGCACGAGCTGGAAGCCAACGGCTATGCCGACATCATCGGTGCTGCCGCCTGA
PROTEIN sequence
Length: 249
PARPHARIAEDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILSGREDYEVTEGDILYNGESILELDPAERAAKGIFLAFQYPVEIPGVATMQFLKVAMNEQRKARGEAELTTPDFMRRVKEASAELKIAPEMLRRPLNVGFSGGEKKRAEILQMSLLEPKLCILDETDSGLDIDALKIVADGVNALRSPDRAVVVITHYQRLLDYIVPDTVHVLYKGQVIKSGDKTLAHELEANGYADIIGAAA*