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SCNpilot_expt_1000_bf_scaffold_5964_curated_24

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(20642..20902)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F926_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 86.0
  • Bit_score: 173
  • Evalue 1.20e-40
Transposase {ECO:0000313|EMBL:EDQ33297.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 86.0
  • Bit_score: 173
  • Evalue 1.70e-40
transposase IS3/IS911 family protein similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 86.0
  • Bit_score: 170
  • Evalue 1.90e-40

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Taxonomy

Hoeflea phototrophica → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTCAGCGGCAAGCTGATGGAATGGGCAGAGAAACAGGGCATCGCCTTAAGCCACATCCAGCCGGGCAAGCCGCAGCAGAATGCTTATGTCGAACGCTATAACCGGACCGTCCGACAAGAATGGCTCGACCAGCACATCATCGAAAGCATTGAGGAGGCACAGGAATTTGCCACGCAGTGGCTATGGACCTACAACAACGAACGGCCCAATATGGGCATCGGCGGCATCACGCCCACACAGAAACTGAAAATCGCCGCGTGA
PROTEIN sequence
Length: 87
VSGKLMEWAEKQGIALSHIQPGKPQQNAYVERYNRTVRQEWLDQHIIESIEEAQEFATQWLWTYNNERPNMGIGGITPTQKLKIAA*