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SCNpilot_expt_1000_bf_scaffold_11271_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3517..3933

Top 3 Functional Annotations

Value Algorithm Source
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D518_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 135.0
  • Bit_score: 218
  • Evalue 3.20e-54
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EYR80659.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 135.0
  • Bit_score: 218
  • Evalue 4.40e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 133.0
  • Bit_score: 187
  • Evalue 3.20e-45

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGACCGCCCTTCCCGCCCGCATCGTCCACCGCACCATCCAGCGCGACTGGCGCGCGGTCTACGATTTCGCATCGAGACCGGAAAACATGCCGCTCTGGGCCTCCGGCCTTGCCGCGGGCCTGACGCGGGACGGCGACGACTGGATCGCCGACGGCAGACCGGTCGGCAATGTGCGCGTGCGATTCGCCCCGCCGAACGATTTCGGGGTCATCGACCACACGGTGACGATGCCGGATGGCCTTCGGGTGGAGAACGCGCTGCGCGTCGTGCCGAACGGCGACGGCGCGGAAGTGATGTTCACCCTGCTCCGCCAGGCCGGCATGGACGACGAGGCCTTCGCCTCCGACGCAGCCCACATCGCCCGCGACCTCGATTCGCTGGCGGAACGGATGGAAGAAAAGGAGATTCCGCGATGA
PROTEIN sequence
Length: 139
MTALPARIVHRTIQRDWRAVYDFASRPENMPLWASGLAAGLTRDGDDWIADGRPVGNVRVRFAPPNDFGVIDHTVTMPDGLRVENALRVVPNGDGAEVMFTLLRQAGMDDEAFASDAAHIARDLDSLAERMEEKEIPR*