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SCNpilot_expt_1000_bf_scaffold_19104_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..174

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 57.0
  • Bit_score: 107
  • Evalue 5.60e-21
Putative membrane protein {ECO:0000313|EMBL:EYR79181.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 57.0
  • Bit_score: 107
  • Evalue 7.80e-21
hypothetical protein; K08978 putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 54.0
  • Bit_score: 79
  • Evalue 3.00e-13

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
TTCCGTGCCCTGCAGATCGGCAAGGCCGCTGAGGTCGCGCCGGTCGACAAGCTGAGCGTCGTGCTCGTCGCCGTCTTCGCCGTCCTCTTCCTCGGCGAGCAGCTTTCCACCGCCCATTGGATCGCGGTGGTGATGATCGGCGGTGGGGCCTTGCTGCTGGCGCTTCCAATATGA
PROTEIN sequence
Length: 58
FRALQIGKAAEVAPVDKLSVVLVAVFAVLFLGEQLSTAHWIAVVMIGGGALLLALPI*