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SCNpilot_expt_1000_bf_scaffold_19611_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(793..1962)

Top 3 Functional Annotations

Value Algorithm Source
Putative cysteine desulfurase 1 {ECO:0000313|EMBL:EYR79844.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EYR79844.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 385.0
  • Bit_score: 649
  • Evalue 2.20e-183
nifS; cysteine desulfurase NifS (EC:2.8.1.7) similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 385.0
  • Bit_score: 547
  • Evalue 3.40e-153
  • rbh
cysteine desulfarase n=1 Tax=Rhizobium meliloti RepID=UPI0003792D5F similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 384.0
  • Bit_score: 547
  • Evalue 8.30e-153
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGACGAAGATGCCGCGCACATATCTGGACTGGAATGCCACGGCGCCGCTTCTGCCGGCGGCACGCGAGGCCGTGGTCGCCGCGCTCGACATGATCGGCAACCCGTCTTCCGTCCATGGCGAGGGCCGGGCGCTGCGCATGCTGGTGGAAGCCGCGCGCCGCGACGTCGCCGCGCTGGTCAATGCGGCGCCGGCGCATGTCATCTTCACGAGCGGCGCGAGCGAGGCGGCGAACCTCGTCCTGACGCCCGGCTATCGCATGGGCCGCACGCCGCTTGCCATCGGCCATCTCTATGTGTCCGAGATCGAGCATCCGGCGCTCCGCGAGGGCGGGCGCTTTCAGCGCGAGGCGGTGACGAGCGTTCCGGTGACGCGCGCCGGCGTGGTGGACCTCGATGCGCTCGATGCGCTGCTCCAGGGCCACGACAAGGCCACGGGCCTGCCCATGGTCGCGATCATGCTGGCCAACAACGAGACAGGCATCGTCCAGCCGGTGAAGGCCGCTGCCGAGATCGTGCGCCGCCATGGCGGGCTCCTCGTCGTGGATGCCGTGCAGGCCGTCGGCCGCATGCCTGTCGATATGGAGGCGCTGGACGCGGACTTCCTCGTCATCTCCTCGCACAAGCTCGGCGGCCCCAAGGGCGCGGGCGCGCTCGTCTCGCGCGGCGAGGTGCTGATGCCCGCACCGCTCATCCGTGGCGGCGGACAGGAGAAGGGGCATCGTTCCGGAACGGAAAACCCCGCCGCGCTCGCCGGCTTTGCCGCGGCAGCCCGCGCTGCGGCGACCGACATGGCCGCGCGCAATGCGGGGATCGCCGCGCTGCGCGACGCCCTGGAGGCGGGCATGCGCGCAGTGACGAACGACATCGTCATCCATGGCAGCGAGGTCGAGCGCGTTGCCAACACCTCCTTCTTCAGCCTTCCGGGCCTCAAGTCCGAGACGGGGCAGATCGCCTTCGACCTCGAAGGCATCGCGCTCTCGGCGGGCTCGGCCTGCTCGTCCGGCAAGGTCGGGCAGAGCCATGTGCTGACGGCGATGGGCTTCGATGCCACGCTCGGCGGCCTTCGCGTTTCGCTCGGGCCGGGCTCGGTGCAGGCGGATGTGGATCGATTTCTGGCGGCTTTCTCGCGCATCGCCTCGCGGCGGCGCGTGACCGGGAACGCGGCCTGA
PROTEIN sequence
Length: 390
MTKMPRTYLDWNATAPLLPAAREAVVAALDMIGNPSSVHGEGRALRMLVEAARRDVAALVNAAPAHVIFTSGASEAANLVLTPGYRMGRTPLAIGHLYVSEIEHPALREGGRFQREAVTSVPVTRAGVVDLDALDALLQGHDKATGLPMVAIMLANNETGIVQPVKAAAEIVRRHGGLLVVDAVQAVGRMPVDMEALDADFLVISSHKLGGPKGAGALVSRGEVLMPAPLIRGGGQEKGHRSGTENPAALAGFAAAARAAATDMAARNAGIAALRDALEAGMRAVTNDIVIHGSEVERVANTSFFSLPGLKSETGQIAFDLEGIALSAGSACSSGKVGQSHVLTAMGFDATLGGLRVSLGPGSVQADVDRFLAAFSRIASRRRVTGNAA*