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SCNpilot_expt_1000_bf_scaffold_6020_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7163..7603

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4T695_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 147.0
  • Bit_score: 273
  • Evalue 1.10e-70
LysR family transcriptional regulator {ECO:0000313|EMBL:EJT01937.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 147.0
  • Bit_score: 273
  • Evalue 1.60e-70
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 146.0
  • Bit_score: 168
  • Evalue 1.20e-39

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGTGCACCAGTCCTACGGCAACTATCCAGACCTCGTCGCCGAGCTGGATTCCGGCCAGATCGATCTTGCGGTGACCCCGACCGGATCGGTGGACCTGCGCGCCGACCTGCAGTTCGAGCCGATCCTCACGGCGCGCAACGTGCTGACCTGCGGCGCCGGCCATCCCCTGGTCCGCAAGCGCAACCTCGCCACGGAGGACATCGTCAACTATCCCTGGATCGCGCCGCTGCCGGGGTCTCCGCTGGTGCTCGACCTGCACAATATCCTGCTGACGCTGGGCCTGGAGGAGGTGTCGCTGCGCTATGCCGGCGGGTCGCTGCTGAGCGTGGTCAATTGCCTTGCCGGCACCGATGCGCTCGCCATTCTGCCGCATTCCGTGGTCCACGCCTTCCGCGGCGAGAACAAGATCAGCATCATCCCGCTCGATATTCCGCAGCCC
PROTEIN sequence
Length: 147
MVHQSYGNYPDLVAELDSGQIDLAVTPTGSVDLRADLQFEPILTARNVLTCGAGHPLVRKRNLATEDIVNYPWIAPLPGSPLVLDLHNILLTLGLEEVSLRYAGGSLLSVVNCLAGTDALAILPHSVVHAFRGENKISIIPLDIPQP