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SCNpilot_expt_1000_bf_scaffold_8750_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4368..5147)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxypyruvate isomerase Hyi n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C2S6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 259.0
  • Bit_score: 485
  • Evalue 4.40e-134
  • rbh
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 259.0
  • Bit_score: 485
  • Evalue 6.20e-134
hyi; hydroxypyruvate isomerase similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 259.0
  • Bit_score: 472
  • Evalue 1.20e-130
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCCGAAATTTGCGGCCAACCTGACCACGCTCTTCAACGAGGCGCCCTTCATGGAGCGCTTCGCCCTGGCCGCCAGGGCCGGCTTCGAGGGGGTCGAATATCTCTTCCCCTACGATTTCGACAAGGACGCGATCCGCGCCGAACTCGACAGGCACGGCCTGACGCAGGTCCTGCACAACCTGCCGGCCGGCGACTGGGCCGGCGGCGAGCGCGGCATCGCGGTCCTGCCGGATCGCGTCGACGAGTTCCGTGAAGGCGTGGCCAAGGCCATCGACTATGCCACGAAGCTCGGCTGCAGGCAGGTCAACTGCCTTTCGGGCATCGCGCCGGCCGGCGTGCCGGACAGCGTGCTGCGCGCCACCTTCGTCGCCAACCTCAAGCTGGCGGCGTCGAAACTCGGCAAGCATGGCATCAGGCTCCTGATCGAGCCGATCAATCACTTCGACATTCCGGGCTTCTACCTCAACACGCCGGACCAGGCGGCCTCGATCATCGCGGAGGTCGGCTCCGACAACCTTTTCATCCAGTACGATCTCTACCATCAGCAGCGCACCGAGGGCGAACTGATCGGCACCTTCAGGAAGCACCAGGCGCACATCCCCCACATCCAGCTTGCCGACAATCCGGGCCGCAACGAGCCGGGCACCGGCGAGATCGCCTGGCCCTTCGTGTTCAGGACGCTCGACGCGCTGGGCTACGACGGCTGGATCGGCTGCGAATACAGGCCGCGCACCACCACCGCGGAAGGTCTCGGCTGGCTGGCCGAAGTCGGCCGCTGA
PROTEIN sequence
Length: 260
MPKFAANLTTLFNEAPFMERFALAARAGFEGVEYLFPYDFDKDAIRAELDRHGLTQVLHNLPAGDWAGGERGIAVLPDRVDEFREGVAKAIDYATKLGCRQVNCLSGIAPAGVPDSVLRATFVANLKLAASKLGKHGIRLLIEPINHFDIPGFYLNTPDQAASIIAEVGSDNLFIQYDLYHQQRTEGELIGTFRKHQAHIPHIQLADNPGRNEPGTGEIAWPFVFRTLDALGYDGWIGCEYRPRTTTAEGLGWLAEVGR*