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SCNpilot_expt_1000_bf_scaffold_3301_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2059..2331)

Top 3 Functional Annotations

Value Algorithm Source
alpA; phage transcriptional regulator, AlpA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 2.30e-44
Phage transcriptional regulator, AlpA n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5E2_KETVY similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 7.40e-44
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ADO44186.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 1.00e-43

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Taxonomy

Ketogulonicigenium vulgare → Ketogulonicigenium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGGCCGAGCGCCGAAACGCGGACCTTCCACCGCGCATGCTGCGTACTCAGGAAGCTGCACGTTTCCTTGGTATTTCTCTTCGCACGCTGGAAAAGCATCGGACCTACGGGACCGGTCCGACCTATCGCAAAATCGGTGGCCGGGTTCTCTACACGGTCGAGGATCTTCAGGCCTGGGCCGACATCGGCGCACGCAAATCCACCAGTGACAAGGACGCCGGCACGGTCTTTCCGGCTCGCCCCCTGACGCCTGAAGAGCGGAGCAAGCTCTGA
PROTEIN sequence
Length: 91
MAERRNADLPPRMLRTQEAARFLGISLRTLEKHRTYGTGPTYRKIGGRVLYTVEDLQAWADIGARKSTSDKDAGTVFPARPLTPEERSKL*