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SCNpilot_expt_1000_bf_scaffold_11596_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3..194)

Top 3 Functional Annotations

Value Algorithm Source
hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 129
  • Evalue 3.60e-28
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpcC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETU4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 129
  • Evalue 1.20e-27
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:AGB74571.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 64.0
  • Bit_score: 129
  • Evalue 1.60e-27

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGCGCGTCGCGCAGGAGGAGATCTTCGGCCCGGTGCTGACGGCCATTCCGTTCAGGGACGAGGCGGAGGCCCTGTCGCTCGCCAACGACGTCCAGTACGGCCTCACCGGCTATCTCTGGACATCGGACGTCACCCGCGCCTTCCGCTTCACCGACCATCTGGAGGCAGGCATGATCTGGGTGAACTCGGAG
PROTEIN sequence
Length: 64
MRVAQEEIFGPVLTAIPFRDEAEALSLANDVQYGLTGYLWTSDVTRAFRFTDHLEAGMIWVNSE