ggKbase home page

SCNpilot_expt_1000_bf_scaffold_15896_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..714

Top 3 Functional Annotations

Value Algorithm Source
Aminomethyltransferase {ECO:0000313|EMBL:CDN52182.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 237.0
  • Bit_score: 416
  • Evalue 1.90e-113
Glycine cleavage system T protein (Aminomethyltransferase) n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R617_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 237.0
  • Bit_score: 410
  • Evalue 1.30e-111
  • rbh
glycine cleavage T protein (aminomethyl transferase) similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 241.0
  • Bit_score: 259
  • Evalue 8.70e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTCTACAAGCGCCTGCTGGAGGTCGGCGAGAAATACGGCATGCTGCGCGCCGGTGCACGCGCCTATTCCTGCGCGGCCATGGAATCCGGCTGGATTCCCTCGCCGCTGCCGGCGATCTACACCGGCGAGGAGATGCGCCCGTACCGCGAATGGCTGCAGGCCGATGGCTTCGAGGCCACATGCTCGGTGGGCGGCAGCTTCCAGCCCGACAATGTCGAGGACTTCTACCTGACGCCGTGGGACCTCGACTACGGCCGCGTGGTCAAGTTCGACCATGATTTCATCGGGCGCGAGGCGCTCGAGAAGATGGCGACGCAGGAGCACCGCACCAAGGTCACGCTCGTCTGGGACAAGGAGGACGTGCTCAGGATATTCGAGGGCATGATGGGCGATTTCCCCGGCCCAAAGCTCATGGAACTGCCGGCGGGGCACTATGCCGCCCATCCCTACGACCAGGTGCTGCTCGGCGAAGAGCTGGGTGGGGTTTCGACCTATCCTGTCTATTCGGCCAACGAGCGCGCCTGGATATCGCTGGCCATGGGCCGTGGCGACCTCGCCCGGCAGGGCACGAAGCTCTCGATCCTGTGGGGCGAAGCCAATGGCGGCACGAAGAAGCCGCATGTCGAACGCCACGTCCAGATGAAGGTCGGTGCGGAAGTCCATCCCTGGCCGATTCACGAAGCCGCCCGCCGGGAATACCGCACGCAGAGCTAG
PROTEIN sequence
Length: 238
VYKRLLEVGEKYGMLRAGARAYSCAAMESGWIPSPLPAIYTGEEMRPYREWLQADGFEATCSVGGSFQPDNVEDFYLTPWDLDYGRVVKFDHDFIGREALEKMATQEHRTKVTLVWDKEDVLRIFEGMMGDFPGPKLMELPAGHYAAHPYDQVLLGEELGGVSTYPVYSANERAWISLAMGRGDLARQGTKLSILWGEANGGTKKPHVERHVQMKVGAEVHPWPIHEAARREYRTQS*