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SCNpilot_expt_1000_bf_scaffold_15896_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1360..1851)

Top 3 Functional Annotations

Value Algorithm Source
alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5BC89 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 161.0
  • Bit_score: 222
  • Evalue 3.40e-55
Alpha-dehydro-beta-deoxy-D-glucarate aldolase {ECO:0000313|EMBL:EWY39743.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 162.0
  • Bit_score: 177
  • Evalue 1.70e-41
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.20); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 162.0
  • Bit_score: 173
  • Evalue 4.30e-41

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
TTGCTCATTCCCTATGTCCAGACGGCCGAGGAAGCAGATTTCGCCGTCCGCGCCAGCCGGTATGCGCCCGCCGGCTTCCGCGGCGTTTCGGCGCTTACACGCGCAACACGGTTCGGCCGCGAAAAGGACTATTTCGACCGCGCGGCAGACGACATCTGCATCATCGTGCAGATCGAGACACAGAGCGGCCTGGACAATTTAGAGGCGATCGCCGCCGGTGAGGGCATAGACGCGCTCTTCGTCGGCCCGGCCGATCTCGCCGCCAGTCTCGGCTACGGAGCCGATCAGGCAAACCCCGCAATGCGTGACATTATCTTGGAGACGATCGGACGCATCAAGGCGGCGGGCAAGCCGGCCGGCCTGCTGACGGGCGATCCGGTGTTGCAAAAGGCCGCCATCCGGGCCGGCGTCGATTTCCTGGGCGTGGGTGTCGACGCAGGCTTGCTTGCTCGTGGTGCCGAGGCCCTGCTCGAAAAAGCCAAAGCCCTTTAG
PROTEIN sequence
Length: 164
LLIPYVQTAEEADFAVRASRYAPAGFRGVSALTRATRFGREKDYFDRAADDICIIVQIETQSGLDNLEAIAAGEGIDALFVGPADLAASLGYGADQANPAMRDIILETIGRIKAAGKPAGLLTGDPVLQKAAIRAGVDFLGVGVDAGLLARGAEALLEKAKAL*