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SCNpilot_expt_1000_bf_scaffold_11541_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(105..587)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2A4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 160.0
  • Bit_score: 300
  • Evalue 7.30e-79
  • rbh
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 160.0
  • Bit_score: 300
  • Evalue 1.00e-78
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 159.0
  • Bit_score: 271
  • Evalue 1.50e-70

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCGGATTGGACTTTTTTCGGTTGGACGGCTGAAGGCCGGCCCTGAGAAGGAACTTGCGGCCCGCTATCTCGATCGTTTCGCGAAGGCCGGCCCCGCCGTCGGCCTGGAACTCGGCAGGCTGGCCGAGGTCGGCGAAAGCCGGGCCGGCAATGCCGAGACGCGCAAGCGCGAGGAAGCGGCCATGCTGGAAAAGGCGCTGCCCGACGGCGCCGTGCTGATCCTGCTCGACGAGCGCGGAAAGTCGCTCGATTCCCCCGCCTTCGCCGATCTTCTCGGCGGCTTCCGCGATGGCGGAAAGCGCGACCTGATGATCGCCGTCGGCGGCGCCGACGGGCTCGACCCCGCCCTTTACGAGCGTGCCAATGCCACGCTCTGCCTCGGCAGGATGACCTGGCCGCACCAGCTCGTGCGCATCCTGCTGGCCGAACAGCTCTACCGCGCCGTCACCATTCTTTCCGGCCATCCCTATCATCGGAGCTGA
PROTEIN sequence
Length: 161
MRIGLFSVGRLKAGPEKELAARYLDRFAKAGPAVGLELGRLAEVGESRAGNAETRKREEAAMLEKALPDGAVLILLDERGKSLDSPAFADLLGGFRDGGKRDLMIAVGGADGLDPALYERANATLCLGRMTWPHQLVRILLAEQLYRAVTILSGHPYHRS*