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SCNpilot_expt_1000_bf_scaffold_15026_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6634..6990

Top 3 Functional Annotations

Value Algorithm Source
Transposase {ECO:0000313|EMBL:KEA04732.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 117.0
  • Bit_score: 192
  • Evalue 2.90e-46
Transposase ISL3 n=2 Tax=Labrenzia RepID=U7G3K2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 117.0
  • Bit_score: 191
  • Evalue 3.50e-46
tnpA; ISL3 family transposase TnpA similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 117.0
  • Bit_score: 146
  • Evalue 5.40e-33

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGACGGCGGCGCGTGATGATCTGGCGAAAACCGAAGCGATTTTGGTGGCAGCGATCGAAGTGGACGTCCCGGAACTCGTGGTCGCCCGTACAGCTATTGGAGACTTCCAGTCCATGATCCGTGCGAAGGCCGCAGCCAAGCTTGATGAATGGCTCCAGGTGGCAAAGATCAGCCTGGTTGGGTCGTTTGCGGGCGGTGTCGAGAAGGACATTGCCGCGGTTCGGAACGCAATCGTTTCGCCATGGTCAAATGGGCAGACCGAGGGGCAGATCACGCGGCTGAAACTGATCAAACACCAGATGTATGGACGCGCAAAACTCGATCTGCCGCAGGCTCGATTGATCGGCGCGATCTAG
PROTEIN sequence
Length: 119
MTAARDDLAKTEAILVAAIEVDVPELVVARTAIGDFQSMIRAKAAAKLDEWLQVAKISLVGSFAGGVEKDIAAVRNAIVSPWSNGQTEGQITRLKLIKHQMYGRAKLDLPQARLIGAI*