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SCNpilot_expt_1000_bf_scaffold_9445_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4992..5333

Top 3 Functional Annotations

Value Algorithm Source
Trigger factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX60_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 113.0
  • Bit_score: 215
  • Evalue 2.90e-53
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 113.0
  • Bit_score: 215
  • Evalue 4.00e-53
trigger factor similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 114.0
  • Bit_score: 177
  • Evalue 2.70e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGCAGCAGTCGCTCTTCCAGCAGCTCCGCCAGTTCCCGGGCCAGGAAAAGCAGATCCTCGAATACTTCCAGAAGACCCCCGGCGCCGCAGCATCGCTCCGCGCCCCGATCTTCGAAGAGAAGGTCGTCGATCACCTGCTCGGCGAGATCAAGGTAACGGACAAGACCGTTTCCAAGGACGAGCTGATGGCTGACGACGAAGAGGGTTCCGAGAAGGAAGCCAAGAAGGCCGCGCCGAAGAAGAAGGCTGCTGCCAAGGCCGAAGCTGCGGAAGGCGAGGAAGCCGCTCCGAAGAAGAAGGCCCCGGCCAAGAAGAAGGCCGCCGAAGGCGACGCCGAGTAA
PROTEIN sequence
Length: 114
MQQSLFQQLRQFPGQEKQILEYFQKTPGAAASLRAPIFEEKVVDHLLGEIKVTDKTVSKDELMADDEEGSEKEAKKAAPKKKAAAKAEAAEGEEAAPKKKAPAKKKAAEGDAE*