ggKbase home page

SCNpilot_expt_1000_bf_scaffold_15529_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(975..1397)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator {ECO:0000313|EMBL:EXL01974.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 139.0
  • Bit_score: 185
  • Evalue 7.20e-44
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 139.0
  • Bit_score: 183
  • Evalue 6.10e-44
Transcriptional regulator, MarR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X6L3_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 139.0
  • Bit_score: 183
  • Evalue 1.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ochrobactrum anthropi → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
TTGCTCGCCCGCCGCTGGCGGAAGGCGCTCGACGAGCGTCTTGCCGAAGCGGGCCTTTCGGACGCCACCTGGGCGCCGCTGATCCATCTCCAGGAGACCGGCGGCGGCGTGACCCAGAAGGAGCTGGCCGCGCTGGTCGGCATCGATGGCTCCAGCCTGGTGCGCTTGCTCGACATCCTCTGCCGGCAGGGGCTCGCCGAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGATGGCGAGCAGCGGGTCGCCGCCATTCGCCGGGAGCTGGCGAAGGGCGAGGAAGAGATGCTGGCGGACATCACGGACGCCGACCTTGCCGCCATGCTTCGCCATTTCGACAGGATCGAGGAGCGGCTTTCCGCCATGCAGGCGCGCCGCCGCGAGGAAAAATCCCGATGA
PROTEIN sequence
Length: 141
LLARRWRKALDERLAEAGLSDATWAPLIHLQETGGGVTQKELAALVGIDGSSLVRLLDILCRQGLAEXXXXXXXXXXXXXXXXXDGEQRVAAIRRELAKGEEEMLADITDADLAAMLRHFDRIEERLSAMQARRREEKSR*