ggKbase home page

SCNpilot_expt_1000_bf_scaffold_37106_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(943..1248)

Top 3 Functional Annotations

Value Algorithm Source
Octanoyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESA8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 101.0
  • Bit_score: 210
  • Evalue 6.30e-52
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 101.0
  • Bit_score: 210
  • Evalue 8.80e-52
lipB; lipoate-protein ligase B (EC:2.3.1.-); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 91.0
  • Bit_score: 165
  • Evalue 7.30e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
CGACCGGACCGCCCGCCGCTGCCGGACGGTTCACCGGCGGAGGACAAGGTGGCGGCCATCGGCATCCGCCTGCGACGCTGGGTGAGCTTTCACGGCTTCTCGCTCAATGTCGATCCGGATCTCGACCATTTTTCCGGCATCGTGCCCTGTGGTATCCGTGGTTACGGGGTGACCAGCCTCGTCGATCTCGGCCTGCCCGTCATGATGAGCGATGTGGATGTGCGCATCCGCGATTCCTTCGAGCACGTCTTCGGCCCCACCGTTTCGGATGCGCACTGTCAGCCGAGCAGCCTGTCGCAGGCATAG
PROTEIN sequence
Length: 102
RPDRPPLPDGSPAEDKVAAIGIRLRRWVSFHGFSLNVDPDLDHFSGIVPCGIRGYGVTSLVDLGLPVMMSDVDVRIRDSFEHVFGPTVSDAHCQPSSLSQA*