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scnpilot_solids2_trim150_scaffold_991_27

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_13

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 29984..30367

Top 3 Functional Annotations

Value Algorithm Source
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YYQ9_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 127.0
  • Bit_score: 225
  • Evalue 2.40e-56
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KGE69522.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 127.0
  • Bit_score: 225
  • Evalue 3.30e-56
trbC; Conjugative transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 127.0
  • Bit_score: 221
  • Evalue 1.40e-55

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACGCAGATGCACGCGACTGCTTTCCGCTTTTCCGTAAATCCGGTTTCCATCCCCGCGCGCCTGCGCCGCCTGGCGGCACCGGCGCAACGCGGCCTGTTGTCGGCGGTCGTCATGCTGATGACGGCTGGCACGGCGCAGGCCGCCGGTTCCTCGATGCCGTGGGAAGGCCCGCTGCAATCAATCCTCGAATCCATCCAGGGGCCGGTCGCGCGCATCGTCGCCGTCATCATCATCATCGCCACCGGCCTTGCGCTGGCCTTCGGCGACACGTCGGGCGGCTTCCGCAAGCTCATCCAGATCGTGTTCGGTCTGTCCATCGCGTTCGCGGCGTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGTGCCGTCGTATGA
PROTEIN sequence
Length: 128
MTQMHATAFRFSVNPVSIPARLRRLAAPAQRGLLSAVVMLMTAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*