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scnpilot_solids1_trim150_scaffold_1039_curated_14

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(17539..18240)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 220.0
  • Bit_score: 378
  • Evalue 1.60e-102
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Microbacterium yannicii RepID=UPI0002ECFB37 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 225.0
  • Bit_score: 393
  • Evalue 1.20e-106
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:KDA06704.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 218.0
  • Bit_score: 382
  • Evalue 3.90e-103

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGACGACGCTCGGCGAAGGCCAAGCCGTGGCCGCCGCCCGTGACGAGGTGGCCGCGCTGCACGGCGAGCTGGTGCGATCCGGTCTCGTCGTTTGGACCGGTGGGAACGTCTCCGGGCGGATCCCCGGCGCGGACCTGTTCGTGATCAAGCCGTCCGGGCTCGCCTATGACGAGATCACGCCGGATACGCTCGTGCTGTGCGACCTCGACGGAAACGTGGTGCCCGGCACGGCCGGCAGCGAGCGCACGCCGTCCAGTGACACCGCGGCACATGCCTACGTCTACCGGCACCTGCCCGAGGTGGGCGGCGTGGTGCACACCCACTCCACGTTCGCTGTCGCCTGGGCGGCTCGGGCGGAGGAGATCCCGTGCGTGATCACCGCCATGGCCGACGAATTCGGCGGGCCGATCCCGGTGGGGCCCTTCGCGATCATCGGCGACGACTCCATCGGCCGCGGGATCGTGGACACGTTGCGGGGACACCGGTCTCGCGCGGTGCTGATGCGAAACCACGGGCCGTTCACCATCGGGAGCACCGCCACCGATGCCGTGAAGGCCGCTGTGATGCTCGAAGACGTGGCACGGTCCGTGCACTACGCACGCCAGGGCGGCCCGCTGGTTCCGATCCCCCAGGATGCCATCGATCGGCTCTACCACCGCTACCAGCACGTCTACGGGCAGCCCGGAGTCGTCGATGAGTGA
PROTEIN sequence
Length: 234
VTTLGEGQAVAAARDEVAALHGELVRSGLVVWTGGNVSGRIPGADLFVIKPSGLAYDEITPDTLVLCDLDGNVVPGTAGSERTPSSDTAAHAYVYRHLPEVGGVVHTHSTFAVAWAARAEEIPCVITAMADEFGGPIPVGPFAIIGDDSIGRGIVDTLRGHRSRAVLMRNHGPFTIGSTATDAVKAAVMLEDVARSVHYARQGGPLVPIPQDAIDRLYHRYQHVYGQPGVVDE*