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scnpilot_solids1_trim150_scaffold_1997_curated_17

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 19044..19373

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SZL5_AMYOR similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 103.0
  • Bit_score: 117
  • Evalue 7.80e-24
transcriptional regulator, PadR-like family similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 103.0
  • Bit_score: 117
  • Evalue 2.50e-24
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AGM08794.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 103.0
  • Bit_score: 117
  • Evalue 1.10e-23

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Taxonomy

Amycolatopsis orientalis → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGTCGGACCAGTCCTTCTTCGTCCTGACCGCGCTCACCGAGGGGCCTCGTCATGGCTACGCCATGATCAAGGACGTCGCCGAGCTGTCCGGCGGGCGGCTGCGGCTGAGCGTCGGCACGTTGTACGGAATCCTCGATCGCCTGAGCGGTCAGGCGGCGATCGAAGTCGATCGCGAAGAGATCGTCGATTCCCGGCTGCGCCGCTACTACCGGCTCACACAGACGGGACGACGCCTGCTCTCCCAGGTGGCCGCCCGGAAAGCGGCCGACGCCGCGGTCGCGTCGGAGCGACTGACGCGACTTGGGCCGATTGCGGGGGCAGCCGGATGA
PROTEIN sequence
Length: 110
MSDQSFFVLTALTEGPRHGYAMIKDVAELSGGRLRLSVGTLYGILDRLSGQAAIEVDREEIVDSRLRRYYRLTQTGRRLLSQVAARKAADAAVASERLTRLGPIAGAAG*