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scnpilot_solids1_trim150_scaffold_1997_curated_26

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 27698..28387

Top 3 Functional Annotations

Value Algorithm Source
Two-component system response regulator TcsR4 n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XXW6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 216.0
  • Bit_score: 250
  • Evalue 1.60e-63
Transcriptional regulator {ECO:0000313|EMBL:GAM46262.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 227.0
  • Bit_score: 256
  • Evalue 3.20e-65
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 235.0
  • Bit_score: 227
  • Evalue 6.00e-57

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Taxonomy

Nocardia seriolae → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGGCAGTCGATGCGGCCTCACAAGTGCTGTCCGGTCTCCGCGTGCTGGTGGTCGAAGACGATCCGGCAATCGGCAGGCAGCTCGCGAAGGGCCTGTCGCGTGACGGGTGCATCGCCTCGCTGGCCGGCACCGGGCGGCAGGCGCTGGCCGCCGACGTGTCGGACTTCGTACTGCTCGACCTCGGGCTGCCCGATGGTGACGGCCTCGACGTGTGCATCGCTTTGCGCCGCAGATCGCGGGTTCCGATCATCGTCGTCACCGCGCGCGGCGCCGAAGCGACACGGATCGCGGCGCTCGACGCGGGAGCGGACGACTACGTCCTCAAACCCTTCGGGCTGGGCGAACTGACCGCCCGCATGCGGGCGGTCCTGCGCCGCATGGGCGGCGGCGGGCCCACCGTCGTCGGGCCGCTGTGGATCGACGTGCCCGCGCGCCAGGTGCGGGTGGCGGGTGAGCCGGTGACGCTGACCGCGCGCGAGTTCGACATCCTGGCCTGTCTCGCCGTCGAACCGGGCCGGGTGGTCAGCCGAGAGGAGATCTTCGACCGCGTGTGGGACGAGCACTGGTACAGCCCGAGGCGTGTGCTGGACGTGCATGTCGCCGCGCTGCGCCGCAAGCTCGGCAGCCCCGCCCTCATCGAGACCGTGTACGGGCGCGGATTCCGCCTTGCCGATCCCGGGCCGGCATGA
PROTEIN sequence
Length: 230
VAVDAASQVLSGLRVLVVEDDPAIGRQLAKGLSRDGCIASLAGTGRQALAADVSDFVLLDLGLPDGDGLDVCIALRRRSRVPIIVVTARGAEATRIAALDAGADDYVLKPFGLGELTARMRAVLRRMGGGGPTVVGPLWIDVPARQVRVAGEPVTLTAREFDILACLAVEPGRVVSREEIFDRVWDEHWYSPRRVLDVHVAALRRKLGSPALIETVYGRGFRLADPGPA*