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scnpilot_solids1_trim150_scaffold_12716_curated_2

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(859..3855)

Top 3 Functional Annotations

Value Algorithm Source
patatin id=12493568 bin=THIO_HI species=Frankia sp. BCU110501 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 999.0
  • Bit_score: 1966
  • Evalue 0.0
patatin similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 999.99
  • Bit_score: 385
  • Evalue 5.80e-104
Patatin {ECO:0000313|EMBL:ABW14909.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 999.99
  • Bit_score: 385
  • Evalue 2.60e-103

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2997
ATGCCTGCCCCCCAGCCCCCTGTTTCGACCAAGGCCTTTCACGAACAGGAGCTGCGCATCGCCCTGGTGATGAACGGCGGAGTCAGCCTGGCGATCTGGATCGGCGGGGTCAGCCAGGAAATCAACCGCCTGGTGCGCGGCGAAACGGTCTACCGGCGGCTGTGCGACGCGTTGAGCCTGCGCCCGCGCGTCGACATCATCAGCGGCACCAGCGCCGGCGGCATCAACGGCGCGCTGCTTGCGCTGGCGATGAGCCAGGGCAAGTCGCTCGATCCGCTGCGCGACATCTGGCTCGACAAGGGCGACCTTCTCACGCTGCTGCGGCAGCCCACGCAGTCGGATGCGCCCTCGCTGCTGGACGGCGGCTACTTCTACAAGGCCATGGTGGAAGGCTTCCAGACAATCCGCGACCAGCAGGGTGCGGGGCTGCAGCCGCCCGCCAGCCTGCCGATCGAGCTTACCCTGACCACCACCGTGCTGTGCGGCGAAGTGCGCGATTTTCCCGACGACCTCGGCACGGTGATCCGCGACGTCACCCATCGCGGCCAGCTCAGGTTCAGCCGCGGTCCCGACGTGCCGGTCGATCATTTTGCCGCGCCCGACATCGTGGCCAGGCTGGCCGCCGCCGCGCGCGCCACGGCGTCTTTCCCCGCCGCCTTCGAGCCGTTCTACCTGCCGGGCGTGAAAGAGAAGGTGAGCGCGGGCGGGGTGCCGGTGCCCTGTCTGCAAGACCACGCCAACTTCAACACCGGATGGGAAACGGGCCGCTTCGTCGTCGATGGCGGCGTGCTCGACAACAACCCGCTGGAGTCCGCCATCGATGCGGTATTCCGTCAGCGTGCCGAGGGCGAGGTGCGGCGCGTGCTCGCCTATGTGGTACCCGACCCCGGCCATATCCCGGACCCGCCGTCCGAAGACCCGGACCGGATTCCCACCCTGATCGGCACCGCGCTGGCTGCCCTGGTCAGTATTCCGCGGGTGGAGTCGGTGTCCGACCAGCTGCGCGCGATTACCCGGCACAACCAGGAGGTTTCGCGTCAGCGCGACACGCGTCTGCTGGTGGCGCGCTCGCTGCAGGACGGGAGGGAGGTGGCCGAGGCTGTCTTCCCCGGCTATCGGCTGCGCCGCGCCCAGAGTGCGGCGGATTACATCGCCGCCGCCCTCGTCGAAGGGGCGGCCCGTCACCGCGACGAAACCGCGCCGGATGTCGCGCTCGGGCGCCGCGCGCGCCAGCGCATTGCCGAAACGCTGCTGCTGGCGCGCGACATGCCCTGGCTGCCCAACAGCTATGCCGATGCGGCCGATCAGACGCACTGGCACTGGGGCATTTTCACCCTGGTAAACGTCATGTCCGCCGTGCTCGACCTGCTGCGCCGGGGCGTCGGGCTGGTGCCGGCGCGCCGCACCGACAGCACCGACGCCTGCTGGCAGGCGCTGATGGCGGCGCGCAAAACCGCCTACGACCTGGTGGCCGAACTTGCCCGTCTGCGCCGTCTCGACCAGCAGCACTGGCTGGAACGCGGCACCGAACTGGCGCCCCGGCTGACGCAACTCGATCATGAGGGAAGCGACGCGCAGCTGGCTGCGCTGTTGCACGCCGAAATGCGCGGTTGGGTGCGGCTGTACGATCCCGATTTTGGCGACGAAGAAGCGCTGCGGCCGCCGCGCGCCTTCACGCGGATGGCGCAGCAAATCGGCGCGCTGTTCCTGGAGAGCATGCCGCTGCTGCGCAAGGTGCTGGCGCTCGGCGTACCGCCGCGCGGCGCCGAGCGCTACGCCGAACTGCGTACTCTGGTGGATTTTCTGCAGCCGCAGCAGGCCGACCTGCCGGGCGCCTGGCAGCGCCTGCTGACGCTGGAAGTGGTGCAATACGCCTTTGGCGCCGACACCACCCGGGACCAGTATCTGGAACTCGTCCAGTTCAGCGCCAACGTGCCCACTTCGTTTGGCGGCCCCTACGCGCTGGAACAGAAACTGGCCGGCGTGCAGGTGGCGCATTTCGGCGCCTTCTACAAACGCTCGTGGCGCATCAACGACTGGATGTTCGGCCGCCTCGACGGTGCCGAGCGCCTCGTCCACATCCTGCTCGATCCCGCCCGCCTGGCCCGGCTGTACGGGCAGGAATCGATCAACCCCGGCGAGTCTGAAGCGGGCGCCAACGCCGTGCTGGAACAGCTGCGCGGCGCCGTGTTCGACGATCTGACGCGCGCCGACGACCACGCGCTGCTGGCGTCGCGCTGGGACAAGCGGCTGCCCGCCATGCGCCGCGAGCTGGCTTTTCTGCACGCCGCCACCGGCCTGCCCGAACAACTGCCCGAATGCGCCGCCATGGTGCTGGAACGGCTGCATCTGGATATCCTGCGGCACGAACTGCCCGCGCTCGCCGACGCCGTGGGCGACGACGAACTCGACGGCGCCGATCCCGGCAGCAACGGCCCCAAATTTCTCAAGCGCTTTCGCGGCGCGATGTTTCCCGATTCCGCGAAACGGACCTGGGGACAGCCCCGTTTCACCCATGCGCCCGACCTGCCCGCGGAACAACTGATCGAACTGTTCAAAGGCGCCAGGGTCGGTGAGGAAAAACTCCTGGCGGAAGCGGGCACCGACCGTTTTACCGTCATGGCCACGCGCTCCGCGGCGGTAGCGGTGTCCGCGCTGTCGGGCAAGGGGTCCGGCATCCGCTGGCTGCGCGGGGTGTTCGCCGCGGTACGCGCGCCGCTGGTGGCGCTGGACATCCTGGTGCGCGCGCTGATGAAAAAAGGGCGGGTCTTTGTCAGCCTGTACGCCATGGCCATGGCCGCCAGCGCCACCGTGCTGCTGGCGGGGCCGCTGGCCGATGCCCGCTGGAGCGGCAGCGTCACCGGCATCGCCGCCTTCATCCTCGGTGCCGGTGTGCTGGTCCTGCTGCGCCGCCATCCCCGGCTGCTGATCGGCCTGGCGCTGCTGGTCCTGCTGATCGCGTTTGGCGTGCCCGCCATCCGCAACGGCCTCGGTTGA
PROTEIN sequence
Length: 999
MPAPQPPVSTKAFHEQELRIALVMNGGVSLAIWIGGVSQEINRLVRGETVYRRLCDALSLRPRVDIISGTSAGGINGALLALAMSQGKSLDPLRDIWLDKGDLLTLLRQPTQSDAPSLLDGGYFYKAMVEGFQTIRDQQGAGLQPPASLPIELTLTTTVLCGEVRDFPDDLGTVIRDVTHRGQLRFSRGPDVPVDHFAAPDIVARLAAAARATASFPAAFEPFYLPGVKEKVSAGGVPVPCLQDHANFNTGWETGRFVVDGGVLDNNPLESAIDAVFRQRAEGEVRRVLAYVVPDPGHIPDPPSEDPDRIPTLIGTALAALVSIPRVESVSDQLRAITRHNQEVSRQRDTRLLVARSLQDGREVAEAVFPGYRLRRAQSAADYIAAALVEGAARHRDETAPDVALGRRARQRIAETLLLARDMPWLPNSYADAADQTHWHWGIFTLVNVMSAVLDLLRRGVGLVPARRTDSTDACWQALMAARKTAYDLVAELARLRRLDQQHWLERGTELAPRLTQLDHEGSDAQLAALLHAEMRGWVRLYDPDFGDEEALRPPRAFTRMAQQIGALFLESMPLLRKVLALGVPPRGAERYAELRTLVDFLQPQQADLPGAWQRLLTLEVVQYAFGADTTRDQYLELVQFSANVPTSFGGPYALEQKLAGVQVAHFGAFYKRSWRINDWMFGRLDGAERLVHILLDPARLARLYGQESINPGESEAGANAVLEQLRGAVFDDLTRADDHALLASRWDKRLPAMRRELAFLHAATGLPEQLPECAAMVLERLHLDILRHELPALADAVGDDELDGADPGSNGPKFLKRFRGAMFPDSAKRTWGQPRFTHAPDLPAEQLIELFKGARVGEEKLLAEAGTDRFTVMATRSAAVAVSALSGKGSGIRWLRGVFAAVRAPLVALDILVRALMKKGRVFVSLYAMAMAASATVLLAGPLADARWSGSVTGIAAFILGAGVLVLLRRHPRLLIGLALLVLLIAFGVPAIRNGLG*