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scnpilot_solids1_trim150_scaffold_156_curated_24

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 23638..24951

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Gordonia polyisoprenivorans RepID=H6MZS9_GORPV similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 449.0
  • Bit_score: 638
  • Evalue 4.00e-180
sigA; RNA polymerase sigma factor SigA; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 449.0
  • Bit_score: 638
  • Evalue 1.30e-180
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 449.0
  • Bit_score: 638
  • Evalue 5.60e-180

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Taxonomy

Gordonia polyisoprenivorans → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
GTGAAGGCCGCTCCGAAGGCCAGCGCGGCCAAGTCGGGGCAGAAATCGAAGACCGCGCCGTCGACGTCCGCCGACGGTGCCAAGCCGCCCCGCCCGAAGGCCTCCGGCACAGGCGGCCGCCCGGCGTCCGCGAAGAAGTCCGCCACCAAGGCCGAGTCCGCCGCCGAGATCGAAGACGCGGAGATCGAGCCCGCCGACGTCGATCTCGACGATCTGGACGAGGTTGCCGCCGACGACGCGGACGGCGATGAGGCCACGCCCGGTGGCGAGGGGGCCGGTGCGGCGCCGCGGGCGGGGGGCACCGCCACCAAGGGCGAGGGCGACGAGTTCACTTGGGACGAGGAAGAGGAATCCGAGGCCCTCAAGCAGGCCCGCAAGGACGCCGAGCTCACCGCGTCGGCGGACTCGGTCCGGGCCTACTTGAAGCAGATCGGCAAGGTCGCGTTGCTCAACGCGGAGGAAGAGGTCTCGCTCGCCAAGCGCATCGAGGGCGGCCTGTACGCCGTCGAATGCATGCGCAAGGTCACCGAGGCGGGCGAGCGGATCTCCACCCAGTTCCGCCGCGACCTGAACTGGGTGAAGCGAGACGGGGAACGGGCCAAGAATCACCTGCTGGAGGCGAACCTGCGGCTCGTGGTCTCGCTCGCCAAGCGGTACACCGGCCGCGGAATGGCCTTCCTCGACCTGATCCAGGAGGGCAACCTGGGCCTGATCCGCGCTGTCGAGAAGTTCGACTACACCAAGGGCTACAAGTTCTCCACGTACGCCACCTGGTGGATCCGGCAGGCGATCACCCGCGCCATGGCCGACCAGGCCCGCACCATTCGTATCCCGGTGCACATGGTGGAGGTCATCAACAAGCTCGGCCGCATTCAGCGCGAACTGCTGCAGGACCTCGGCCGCGAGCCCACGCCGGACGAGCTCGCCAAGGAAATGGACATCACCCCGGACAAGGTCCTGGAGATCCAGCAGTACGCCCGCGAGCCCATCAGCCTGGACCAGACGATCGGCGACGAGGGCGACAGCCAGCTCGGCGACTTCATCGAGGACTCCGAAGCCGTGGTCGCCGTCGATGCCGTGTCGTTCACGCTGCTGCAGGATCAACTGCAGTCCGTGCTGCAGACGCTGTCCGAGCGCGAGGCCGGCGTGGTGCGGCTGCGCTTCGGGCTGACCGACGGGCAGCCGCGCACCCTGGACGAGATCGGCCAAGTGTACGGCGTCACCCGAGAACGGATCCGTCAGATCGAGTCGAAGACGATGTCGAAGCTGCGTCATCCGTCCCGGTCGCAGGTGCTGCGCGACTACCTCGAGTAG
PROTEIN sequence
Length: 438
VKAAPKASAAKSGQKSKTAPSTSADGAKPPRPKASGTGGRPASAKKSATKAESAAEIEDAEIEPADVDLDDLDEVAADDADGDEATPGGEGAGAAPRAGGTATKGEGDEFTWDEEEESEALKQARKDAELTASADSVRAYLKQIGKVALLNAEEEVSLAKRIEGGLYAVECMRKVTEAGERISTQFRRDLNWVKRDGERAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPDELAKEMDITPDKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLQTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLE*