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scnpilot_solids1_trim150_scaffold_330_curated_2

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 2568..3980

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 484.0
  • Bit_score: 657
  • Evalue 2.80e-186
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 484.0
  • Bit_score: 657
  • Evalue 1.30e-185
Diaminopimelate decarboxylase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIA2_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 484.0
  • Bit_score: 657
  • Evalue 9.00e-186

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
GTGATCGCGCACCCCGCCGGGCCGCGGCACGCCGACGTCATCCCGCCGGATCGCCCCGCCCACACGGCTGCCGCGAACCTCAACGCCCTTGCCCAGAAGGTCTGGCCGCGCGGAACGGACCGCACCGCGGGTGGCGTCATGCGTCTGGGCGGACTCGACGTGCGTGCGCTCGCCGAGCAGTACGGCACCCCGCTCATGGTGATGGACGAGCGCGACTTCCGCAGCCGTTGCCGGGATTTCGCGGTCGCGTTCGGCGGCCCGGCCAACGTGCACTACGCGGGCAAGGCATTCCTGTCCGGCGCGGTGCTGCGTTGGCTTGCCGATGAGGAACTCGGCCTGGATGTATGCTCCGGCGGCGAGTTGGCGCTGGCACTGCGGGCCGGGTTTCCCGCGGCGCGTATCGCACTGCACGGCTCCAACAAGTCCGAGGCCGAGCTGCAAGCGGCGATCGACGCCGGCCTCGCAGCGATCGTCGTCGATTCGTTCGAGGAAATCGCGCGCCTGGCGAGCATGACGCTGCAGCGTGCCGATCCCGTGCCGGTGATGGTCCGGGTGACCGTCGGGGTCGAGGCGCACACGCACGAGTTCATCGCCACCGCCCACGAGGATCAGAAGTTCGGCTTCTCACTGACCGGGGGAGACGCGGATGAGGCGGTCCGGCGGGTCGTCGCTGCAGAGGGCCTGGTGCTGGTGGGACTGCATTCGCACATCGGCTCGCAGATCTTCGACCCGGCCGGCTTCGAGGTTGCTGCCCACCGGGTCGTGGCGCTGTTGGCGCGGCTGGTCGAGGTCTATCCCCAGCTCGCCCAGACCGTCACGACCCTCGATCTGGGCGGCGGCATGGGCATTGCCTACACGGAGGACGACGATCCGCCGACGCCCGCCGCCATGGCGGCATCGCTCACGGCAATCGTGCAGCGGGAATGCAGAGCGGCGGGGCTGCCGGTGCCGCGAATCGCCGTGGAACCGGGCCGGGCCATCGTCGGACCGTGCGGCGTCACGATCTACGAGGTCGGCACGATCAAGGACGTGCGACTGGACGGTGGCGCGGAGCGGCGCTACGTGTCGATCGATGGCGGGATGAGCGACAACATCCGTACCGCTCTGTACGGTGCGGAATACACCCTGGCGCTCGCTTCACGCTCCTCGGCCGCTCCGGCAGCACTCTGTCGCGTGGTCGGAAAGCACTGCGAGAGCGGCGATATCGTGGTACGCGACTGCTACCTGCCCGCAGATCTCGCGCCGGGCGATCTGTTGGCGGTCGCCGCCACCGGCGCGTACTGCTACGCCATGGCGTCGAACTACAACCGACTGCCGAAGCCGGCCGTGGTCGCAGTCGGAGACGGGCGGTCCGCCGTGATGCTGCGCCGTGAAACGATGGACGATCTGATGAGCCTGGAAGTGTGGGAGTAG
PROTEIN sequence
Length: 471
VIAHPAGPRHADVIPPDRPAHTAAANLNALAQKVWPRGTDRTAGGVMRLGGLDVRALAEQYGTPLMVMDERDFRSRCRDFAVAFGGPANVHYAGKAFLSGAVLRWLADEELGLDVCSGGELALALRAGFPAARIALHGSNKSEAELQAAIDAGLAAIVVDSFEEIARLASMTLQRADPVPVMVRVTVGVEAHTHEFIATAHEDQKFGFSLTGGDADEAVRRVVAAEGLVLVGLHSHIGSQIFDPAGFEVAAHRVVALLARLVEVYPQLAQTVTTLDLGGGMGIAYTEDDDPPTPAAMAASLTAIVQRECRAAGLPVPRIAVEPGRAIVGPCGVTIYEVGTIKDVRLDGGAERRYVSIDGGMSDNIRTALYGAEYTLALASRSSAAPAALCRVVGKHCESGDIVVRDCYLPADLAPGDLLAVAATGAYCYAMASNYNRLPKPAVVAVGDGRSAVMLRRETMDDLMSLEVWE*