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scnpilot_solids1_trim150_scaffold_330_curated_7

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 7820..9817

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 670.0
  • Bit_score: 792
  • Evalue 3.60e-226
Transcription termination factor Rho n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WHL1_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 696.0
  • Bit_score: 792
  • Evalue 4.30e-226
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 696.0
  • Bit_score: 792
  • Evalue 1.40e-226

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1998
GTGACCGATACCACGGAGCACGCAGCGACCGGCACATCTGCCGGGAGCAAGAGTCTGTCGGCGATGACGTTGGCAGATCTCAAGTCCATGGCCGGCGCACGCGGCCTGAAGGGCATTTCCCAGCTGCGCAAGGGCGATCTCGTCGCGCTGCTGGCCGGCGGGCACGCGGCTGCCACCGCCGATGGTTCGACGGGCGGAACCGCCAACGGCCCGGCGCATGACGCGCCGACCGGGGCGGCAGCATCGCAGCGACCGCGCCGCGCCGCTTCCCGCGGTGCAGGGGCACCCGAGTCGCAGCCGGCACTGCTCGCCGACAGTGATGCGATCAGCGCACCGCGACACGCTGCCGGGGCCGACGAGACTGTGAAAGACGTCGGCCGGGAGTCCGGCCGATCGCGGCGGGACCGTCGTGGGCGCCGCGACGGGGCCGATTCCGGACCGGAGCAGCTCTCGGCCGGGCGCGTCGCGGACGACGTCGCGCCGCAGCCGGAGCACCCGGAGCGCGGCGGACGGCAGGAGCGCGGCGAGCGTCCTGACCGCTCCGAGCGCGGCGAGCGCGGAGACAAGCAGGACCGGGGTGACCGCACCGGGCGGGGCGACAATCGCAGCGATTCGCGGAGTGATCGCGGTGATCGCAACGATCGCGGCGACCGGGGTGACCGGGGTGATCGCGGCGATCGCGGCGACCGGGGTGATCGCAACGATCGCGGCGATCGCAACGATCGGGGTGACCGCAGTGACCGCAACGATGAGGACGATCGTGACGGCGGCCGCCGTCGCGGTCGGCGCTACCGTGATCGCAACCGTCGCGGACGCGACCGCTACGCCGACGCGGGCGAGCCAGAGGTGCGTGAGGACGACGTCCTGGTACCGATCTCTGGTGTGGTGGACGTGCTCGACTCGTATGCCTTCGTCCGCACGGCCGGCTACCTGGCCGGTCCGAAGGATGTCTACGTCTCGATGTCGCAGGTGCGCAAGTACGGCCTGCGTCGCGGCGACATGGTCACCGGCGCGATCAAGGCGCCGCGCGACGGTGAGCAGGGATCGGGGCGGCAGAAGTTCACACCTCTCGCGAAGATCGACACCATCAACGATCTCGATCCGGAGCTGATGCGCAATCGTCCCGAGTTCACGAAGCTCACCCCGCTGTATCCGAACGAACGACTTCGCCTCGAGACCGAGCCGCATATTCTGACGACCCGTGTCATCGATCTGGTGATGCCGGTCGGCAAGGGCCAGCGCGCCTTGATCGTGTCCCCGCCGAAGGCCGGCAAGACGTCGATCCTGCAGGCCGTCGCCAATGCGATCAGCACCAACAACCCGGAATGCCACCTCATGGTGGTGCTGGTCGATGAGCGGCCCGAAGAGGTCACCGACATGCAGCGCTCGGTGAAGGGCGAGGTCATCGCTTCGACCTTCGACCGGCCGCCGAGCGATCACACATCGGTGGCTGAACTGTCCATCGAGCGCGCGAAGCGGCTGGTGGAGATGGGCAAGGACGTGGTCGTGCTGCTCGACTCGATCACCCGGCTCGGCCGCGCCTACAACCTGGCCGCGCCTGCCTCCGGTCGCATCCTGTCCGGCGGCGTCGACTCGACGGCGCTGTTCCCGCCCAAGCGGTTCCTGGGCGCGGCCCGCAACATCGAGAACGGCGGCTCGTTGACGATTTTCGCCTCCGCGCTGGTGGAGACCGGCTCGGCCGGCGATACCGTCATCTTCGAGGAGTTCAAGGGAACCGGCAACGCCGAGCTGAAGCTCGATCGCAGACTCGCCGACAAGCGGCTGTTCCCCGCGATCGACGTCGACGCCTCCTCGACCCGCAAGGAAGAGCTGCTGATGGGCCCGGACGAGCTGGCCGTCACGGTGCGGCTGCGCCGGGTGCTGGCGGCTCTGGAGCCGCAGCAGGCTCTGGAGGTCGTGCTGGATCGGCTGCGCAAGACCAAGACGAACGCCGAGTTCCTGATGACGGTGGCCAAGAACATGCCCCTGTCCGAGTAG
PROTEIN sequence
Length: 666
VTDTTEHAATGTSAGSKSLSAMTLADLKSMAGARGLKGISQLRKGDLVALLAGGHAAATADGSTGGTANGPAHDAPTGAAASQRPRRAASRGAGAPESQPALLADSDAISAPRHAAGADETVKDVGRESGRSRRDRRGRRDGADSGPEQLSAGRVADDVAPQPEHPERGGRQERGERPDRSERGERGDKQDRGDRTGRGDNRSDSRSDRGDRNDRGDRGDRGDRGDRGDRGDRNDRGDRNDRGDRSDRNDEDDRDGGRRRGRRYRDRNRRGRDRYADAGEPEVREDDVLVPISGVVDVLDSYAFVRTAGYLAGPKDVYVSMSQVRKYGLRRGDMVTGAIKAPRDGEQGSGRQKFTPLAKIDTINDLDPELMRNRPEFTKLTPLYPNERLRLETEPHILTTRVIDLVMPVGKGQRALIVSPPKAGKTSILQAVANAISTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELSIERAKRLVEMGKDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALFPPKRFLGAARNIENGGSLTIFASALVETGSAGDTVIFEEFKGTGNAELKLDRRLADKRLFPAIDVDASSTRKEELLMGPDELAVTVRLRRVLAALEPQQALEVVLDRLRKTKTNAEFLMTVAKNMPLSE*