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scnpilot_solids1_trim150_scaffold_330_curated_78

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 79800..80747

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 311.0
  • Bit_score: 337
  • Evalue 3.30e-90
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 7000 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 311.0
  • Bit_score: 337
  • Evalue 1.50e-89
tRNA pseudouridine synthase B n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJC5_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 311.0
  • Bit_score: 337
  • Evalue 1.10e-89

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGAACGCGGCCGGTGTCGGCGGGCCGACCGGCTTGCTGCTGATCGACAAGCCCGGCGGCGTGACGTCGCACGACGTCGTGGCGCGTGTGCGCGCCATCCTGTCCACCCGGCGCGTCGGTCACGCCGGCACACTCGACCCCATGGCGACCGGTCTGCTGGTGGTCGCCGTGGGCCGAGCCACGAAATTGCTCGGCCATCTCGCCATGGCGGAGAAGTCGTATACGGCGACCATCCGGCTCGGTGAGTCCACGGACACCGATGACGCCGAGGGGAAGGTGATCTCGAGCCGCGACGCCTCTGCGCTCTCCCCGGACGACATCCGATCGGGTATGACGCCGTTCACCGGCGATATCGAACAGGTGCCCAGTTCGTATTCGGCGATCAAGGTCGGCGGCAGACGCGCCTACGATCTGGCCCGGTCCGGCCAGGACGTGGCGCTGGCCGCACGGCGGATCACCGTGGCACGCTTCGAACCGGTGGCGGCACTGCGCCGCGTCGAGGACTGCCTCGACGTGGACGTCGCCATCGACTGCAGTACCGGCACCTATGTCCGCGCCCTGGCGCGCGACCTGGGTGAGCGCCTCGGAGTCGGCGGGCACCTCACGGCACTGCGTCGAACCGCCATCGGCCCGTTCGAGGTCGCCGAGGCCATCGACGTGTTCCCGGACGGTGTGCTGCCGCGGGGCGAACCCCGCCCGCCCATCGGTGACGAGTTGCGAGCCCGGACCGGCAGCAGCGTCATGCCCGTCTCCACCGCGGTCGGTCGCGCGCTGCCCACGCGAGTCGTGGGCAGGGAACTGGCCGCGGACCTTCGCTTCGGGCGCCGGATTCCGGCAGCCGGCATCGTGGGGACGTACGCGGTCACCGACTCCGCGGGCGCGTTTCTCGCGCTGGTGACGGAGGATGGGCCCGTCGCGAAACCGGTCTTCGTCTGGAATGCGGAGTGA
PROTEIN sequence
Length: 316
VNAAGVGGPTGLLLIDKPGGVTSHDVVARVRAILSTRRVGHAGTLDPMATGLLVVAVGRATKLLGHLAMAEKSYTATIRLGESTDTDDAEGKVISSRDASALSPDDIRSGMTPFTGDIEQVPSSYSAIKVGGRRAYDLARSGQDVALAARRITVARFEPVAALRRVEDCLDVDVAIDCSTGTYVRALARDLGERLGVGGHLTALRRTAIGPFEVAEAIDVFPDGVLPRGEPRPPIGDELRARTGSSVMPVSTAVGRALPTRVVGRELAADLRFGRRIPAAGIVGTYAVTDSAGAFLALVTEDGPVAKPVFVWNAE*