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scnpilot_solids1_trim150_scaffold_2037_curated_3

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(1439..2866)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWC1_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 467.0
  • Bit_score: 470
  • Evalue 2.10e-129
MFS transporter {ECO:0000313|EMBL:EWT05725.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 468.0
  • Bit_score: 565
  • Evalue 6.60e-158
EmrB/QacA family drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 467.0
  • Bit_score: 470
  • Evalue 6.50e-130

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGCCGGATTGGCGCCGCCTGCTGCGAGAGCCCGCCCGGCCGGATGCCATCCGAAGCCGCCCCAACGCGCACTGGTATGCCGTCGCCACCGTGTGCATCGGCGCGTTCATGGGACAGCTCGACGCCTCCATCGTCACTCTGGCGTTTCCCGCCCTCGAGGACGAGTTCGGGGCCGGCATCGGCGCCGTCACGTGGGTGGGCCTCACCTACCTGCTGGTCCTCGTCGGCCTCGTCGCCCCGGTCGGTCGGCTGGCAGATATGGCCGGCCGCAAGCTGCTCTACACCTACGGCTTCGCCGTCTTCATCCTCGGCTCGGCGCTGTGCGGGTTCGCGCCAAACCTATTGACCCTCAACCTTTTTCGGGCCGCGCAGGCGGTGGGCGCCGCCATGCTGCAGGCCAACAGCGTCGCCATCATCTACGCGGCCATGCCGCGTGACAAGCTCGGCCGCGGCATCGGCATCCAGGGCGCCGCGCAGGCTCTCGGTCTCGCCCTCGGACCAACGGTCGGGGGCCTGCTGGTGCAGGCCGGCGGGTGGCGGTGGATCTTCTGGGTCAACGTGCCCATGGGCATCGCCGGGGTGGTGCTGGGCTGGCTGTTCATCCCGCGGTCCCGGAACCTGGTGAGCCGCAGCCCGTTCGACTTCACCGGCCTGGCGCTGTTCTTCCCCGGGGTCGCGGCGCTGCTGGCCGCGATCTCGCTCGGCAACGACGCCGGCTGGACGTCGCCGTGGATTCTGGTGCTCTTCGCCGTCGCCGTCGCGGCGCTGGCCGCCTTCCTGCTGCGCGAGCGCGTCACGGCCTCGCCCATGCTGCCGCTCGCACTGTTCCGCCGCCTGCCGTTCACCGCGGGGATCGGCAGCGGCCTGCTCTCGTACCTCGTCATGTTCGGCACGCTGTTCGTCGTGCCGTTCTATCTGCAGCGGGCGCTGGGGCTCGGCCCCAGCCGGTCCGGACTGATCCTCACCGTGATGCCCGTCGTACTCGGCGTCATCGCGCCGCTGGCAGGTCGCTGGGCCGACCGGGTCGGTCCCCGGCCGCTGACGGTGTCCGGCATGGTCGTCTGCGCGGTCGCCCTGGCCGGTCTGGCGCTGCTGGAATCGGATATGACGCTGCTCGTGGCCGGGCTCGTGCTGCTGGGCATCGGAATGGGCCTGTTCACTCCGCCGAACAACGCGGCCATCATGGCAGCGGCACCGGGCGACCAGTCGGGCGTGGCGGCGGGCGTCCTCAACATGACGCGCGGCATCGGCACCGCCCTGGGATTGGCCGCCACCGGCCTGGTCTTCGCGGCGGTCGCCGGCGAGAACGCCTCGGCGGCCGATCTCGTCACGCGCGGTTTCTCCGCGGCTGCCTGGTTTCTCGCCGCGGTGGCGGCCGTGGCCGCGGTGCTGTCGGCCCTGCGCGGTCGCGCCCGTCTGGATCCGTGA
PROTEIN sequence
Length: 476
MPDWRRLLREPARPDAIRSRPNAHWYAVATVCIGAFMGQLDASIVTLAFPALEDEFGAGIGAVTWVGLTYLLVLVGLVAPVGRLADMAGRKLLYTYGFAVFILGSALCGFAPNLLTLNLFRAAQAVGAAMLQANSVAIIYAAMPRDKLGRGIGIQGAAQALGLALGPTVGGLLVQAGGWRWIFWVNVPMGIAGVVLGWLFIPRSRNLVSRSPFDFTGLALFFPGVAALLAAISLGNDAGWTSPWILVLFAVAVAALAAFLLRERVTASPMLPLALFRRLPFTAGIGSGLLSYLVMFGTLFVVPFYLQRALGLGPSRSGLILTVMPVVLGVIAPLAGRWADRVGPRPLTVSGMVVCAVALAGLALLESDMTLLVAGLVLLGIGMGLFTPPNNAAIMAAAPGDQSGVAAGVLNMTRGIGTALGLAATGLVFAAVAGENASAADLVTRGFSAAAWFLAAVAAVAAVLSALRGRARLDP*