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scnpilot_solids1_trim150_scaffold_9385_curated_4

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(2830..3009)

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 59.0
  • Bit_score: 105
  • Evalue 5.30e-21
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=288705 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Renibacterium.;" source="Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484; / NBRC 15589 / NCIMB 2235).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 59.0
  • Bit_score: 105
  • Evalue 2.40e-20
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003697D89 similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 59.0
  • Bit_score: 107
  • Evalue 4.40e-21

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Taxonomy

Renibacterium salmoninarum → Renibacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ACCGGCTTCTTCGCGCGCTGCCTGCAGCACGAGACCGACCATTTGGAGGGCCTGCTGTACCTGGACCGGTTGATCGGACGGTACAAGCGCGAGGCCAGGCGCATGGTGCGCGACCGCGGGTTCGGGGTGCCGGGGCTGTCCTGGCTGCCGGGCACCGACCCGGATCCGTTCGGGCACTGA
PROTEIN sequence
Length: 60
TGFFARCLQHETDHLEGLLYLDRLIGRYKREARRMVRDRGFGVPGLSWLPGTDPDPFGH*