ggKbase home page

scnpilot_solids1_trim150_scaffold_593_curated_58

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(62982..63866)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPP9_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 295.0
  • Bit_score: 458
  • Evalue 6.60e-126
Integrase {ECO:0000313|EMBL:KJC62829.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 295.0
  • Bit_score: 460
  • Evalue 1.40e-126
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 295.0
  • Bit_score: 458
  • Evalue 2.10e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agreia bicolorata → Agreia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGAAAGAGCTCGCTGCCGACGGGATCCCCGTCGCGGTGACGTGCCGGGTCTTGAAGCTCTCGCGTCAGCCCTACTACCGGTGGCTGGCCGATCCGATCACCGCCAGCGAGACCGTAGCGGCGTATCGCGCGAACGCGCTGTTCGACGCGCACCGCGATGATCCGGAGTTCGGGCATCGGCTCCTGGCCGATGAGGCCCGCGCCGCCGGGCAGCCGATGGCTGACCGCACTGCCTGGAAGATCGCCTCGGAGGGCGGCTGGTGGTCCGTGATCAGCAAGAAGCGCGGCAAGGGAGCAAAACCCGGGCCGGCCGTTCACGACGACCTGCTGGCCTTCGAAGACGACCACGGGGTCATCCGTCACTGCTTCACCGCTGACGGACCGAACCGGGTGTGGTTGACGGACATAACGGAGCATCGCACCAGCGAGGGCAAGCTTTACATTTGCGCGGTCAAGGACCTCTACTCGGGCCGGATCGTGGGCTACTCCATCGACGCGCGCATGAAGTCGAGTCTGGCCGTCGCTGCGCTCCGATCGGCCGTCACCAGACGAGGTAATGTCGCCGGCTGCATCGTTCACTCCGACCGCGGGTCGCAATTCAGATCGCGAAAATACCTGCGCGAGTTACGGTTTCACCGCCTACGCGGGTCGATGGGCCGAGTTGCCGCGGCCGGGGACAACGCCGCCATGGAATCATTCTTCGCCCTCCTGCAGAAGAACGTCCTCAACCGGCGCTCCTGGACCACCCGCGAGCAGCTCCGCATCGCGACCGTCACCTGGATCGAACGCACCTACCACCGCAGGCGCAGACAAGCCCGGCTCGGCCGCTTGACCCCCATCGAATTCGAAGCAATCATGACCACGCCAGCCAACCTGGCAGCGTGA
PROTEIN sequence
Length: 295
VKELAADGIPVAVTCRVLKLSRQPYYRWLADPITASETVAAYRANALFDAHRDDPEFGHRLLADEARAAGQPMADRTAWKIASEGGWWSVISKKRGKGAKPGPAVHDDLLAFEDDHGVIRHCFTADGPNRVWLTDITEHRTSEGKLYICAVKDLYSGRIVGYSIDARMKSSLAVAALRSAVTRRGNVAGCIVHSDRGSQFRSRKYLRELRFHRLRGSMGRVAAAGDNAAMESFFALLQKNVLNRRSWTTREQLRIATVTWIERTYHRRRRQARLGRLTPIEFEAIMTTPANLAA*