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scnpilot_solids1_trim150_scaffold_1078_curated_15

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 20682..21488

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 250.0
  • Bit_score: 354
  • Evalue 2.90e-95
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 250.0
  • Bit_score: 354
  • Evalue 1.30e-94
Pseudouridine synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHP1_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 250.0
  • Bit_score: 354
  • Evalue 9.30e-95

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGACGAATGACAATGACGAGGGCGGCGTCATGCCCGCTCATGAGCACGACGGCGCCGAGAAGCGCGCTGCCACATCGGAACTCGTGCGGCTGCAGAAGGTGCTCTCCGGCGCCGGCGTGGCCTCGCGGCGCAAGGCGGAGGAGCTGATCCGGCAGGGCCGGGTGCGCGTGGACGGCGTCGTGGTGCGCGACATGGGCGTGAAGATCGACCCGGATGCGGCCATCGTGCACGTCGACGGCAACCGGGTGCAGCTGCGCGCCGATTTGGAGTACCTGGCCCTGAACAAGATGCCCGGCGTGCTGTCCACCATGTCCGACGACGAAGGCCGCGCCACCATCGGCGACCTGCTCGACGACTGGGGCATCACCACCCGCCTCTATCACGTGGGCCGGCTGGACATCGACTCCGAGGGGCTGCTCCTGCTGACCAACGACGGCGAACTCGCGCACCGGCTCACCCACCCGTCGTTCGGCGTGCCGAAGACCTACATGGCCGAGATCCCCGGCCCGGTGCCGCGCGATCTGGGCCGCACGCTGCTGCGGGGCATCGACCTGGAGGACGGCCCTGTGAAGCTCGACGCCTTCGACGTGGTCGATGTGCTGGGCGGTCGCGCCGTCGTCAAGGTGGTGCTGCACGAGGGCCGCAAACGCCTGGTGCGGCGCATGCTGGAGGCCACGGGGCATCCCGTGTCGCGACTGGTGCGCACCCAGATCGGCGATTTGCAGCTCGGCCACCAGCGGCCCGGCACGGTGCGGCGGCTGAACCCGGTCGAGGTGTCCAAGCTCTACCGGGCGGTCGGGCTGTGA
PROTEIN sequence
Length: 269
MTNDNDEGGVMPAHEHDGAEKRAATSELVRLQKVLSGAGVASRRKAEELIRQGRVRVDGVVVRDMGVKIDPDAAIVHVDGNRVQLRADLEYLALNKMPGVLSTMSDDEGRATIGDLLDDWGITTRLYHVGRLDIDSEGLLLLTNDGELAHRLTHPSFGVPKTYMAEIPGPVPRDLGRTLLRGIDLEDGPVKLDAFDVVDVLGGRAVVKVVLHEGRKRLVRRMLEATGHPVSRLVRTQIGDLQLGHQRPGTVRRLNPVEVSKLYRAVGL*